All Classes and Interfaces
Classes
Class
Description
TODO Document Me
Base class for ontology-based tests.
Fixture for testing filtering of matrices.
T
Most benchmarks come from R, using things like cor.test(rnorm(50), rnorm(50), method="spearman",
alternative="two.sided"),
For this test to work, you need to have R installed, the R_HOME environment variable set and rJava installed with
the JRI library.
TODO Document Me
Test loading a database-backed ontology
Test initialization of all providers not already covered by a specific test.
Most of these tests were moved over from Gemma.
For this test to work, you need to have Rserve running on the default port (6311).
Tests based on Cooper and Hedges.
See the file test/data/matrix-testing.xls for the validation.
See the file test/data/matrix-testing.xls for the validation.
$Id$
Gold standard (?)