Package ubic.basecode.math

Class CorrelationStatsTest

java.lang.Object
ubic.basecode.math.CorrelationStatsTest
public class CorrelationStatsTest extends Object
Most benchmarks come from R, using things like cor.test(rnorm(50), rnorm(50), method="spearman", alternative="two.sided"),

OR (where the first argument is n, second is S (rounded off) 

 1-.C("prho",as.integer(10),as.double(4),double(1),integer(1),as.logical(FALSE),PACKAGE="stats")[[3]]
Author:
paul

  • Constructor Details

    • CorrelationStatsTest

      public CorrelationStatsTest()

  • Method Details

    • testCorrel

      public void testCorrel()

    • testCorrelAsByte

      public void testCorrelAsByte()

    • testCorrelationForPvalue

      public void testCorrelationForPvalue()

    • testCorrelTooSmall

      public void testCorrelTooSmall()

    • testInverseFisherTransform

      public void testInverseFisherTransform()

    • testPvalue

      public void testPvalue()

    • testSpearmanPvalueA

      public void testSpearmanPvalueA()

    • testSpearmanPvalueA2

      public void testSpearmanPvalueA2()

    • testSpearmanPvalueB

      public void testSpearmanPvalueB()

    • testSpearmanPvalueD

      public void testSpearmanPvalueD()

    • testSpearmanPvalueD2

      public void testSpearmanPvalueD2()

    • testSpearmanPvalueE

      public void testSpearmanPvalueE()

    • testSpearmanPvalueEh

      public void testSpearmanPvalueEh()

    • testSpearmanPvalueEm

      public void testSpearmanPvalueEm()

    • testSpearmanPvalueF

      public void testSpearmanPvalueF()

    • testSpearmanPvalueG

      public void testSpearmanPvalueG()

    • testSpearmanPvalueG2

      public void testSpearmanPvalueG2()

    • testSpearmanPvalueTDist

      public void testSpearmanPvalueTDist()