All Classes
AbstractFilter
AbstractGraph
AbstractGraphNode
AbstractLevelFilter
AbstractMatrix
AbstractMatrix3D
AbstractMatrixReader
AbstractOntologyMemoryBackedService
AbstractOntologyResource
AbstractOntologyService
AbstractRClient
AffymetrixProbeNameFilter
AnnotationProperty
AnnotationPropertyImpl
AnnotatorClient
AnnotatorResponse
AnovaEffect
AnovaResult
BatchIterator
BinaryTree
BinaryTreeNode
BitUtil
Blas
BrowserLauncher
ByteArrayConverter
CellLineOntologyService
CellTypeOntologyService
ChainedStatement
ChainedStatementObject
CharacteristicStatement
ChebiOntologyService
ClassStatement
ColorMap
ColorMatrix
CompressedBitMatrix
CompressedSparseDoubleMatrix
Configuration
ConfigUtils
Constants
CorrelationEffectMetaAnalysis
CorrelationStats
CountingMap
CreateSpreadSheet
DataStatement
DatatypeProperty
DatatypePropertyImpl
DateUtil
DenseDouble3dMatrix
DenseDoubleMatrix
DenseDoubleMatrix1D
DenseObject3DMatrix
DensityGenerator
DescriptiveWithMissing
DesignMatrix
DirectedGraph
DirectedGraphNode
Dirichlet
DiseaseOntologyService
Distance
DoubleAddingMap
DoubleMatrix
DoubleMatrix3D
DoubleMatrixFactory
DoubleMatrixReader
DoublePoint
Dqrsl
ExcelUtil
ExperimentalFactorOntologyService
FastRowAccessDoubleMatrix
FileTools
Filter
FMAOntologyService
GenericAnovaResult
GenericOntologyService
GenericStreamConsumer
Graph
GraphNode
Histogram
HistogramReader
HistogramSampler
HistogramWriter
HTest
HumanDevelopmentOntologyService
HumanPhenotypeOntologyService
IndexerSelector
InstanceStatement
IntegerMatrix
ItemLevelFilter
JGradientBar
JRIClient
KruskalWallis
KSTest
LeastSquaresFit
LinearModelSummary
Link
MammalianPhenotypeOntologyService
MapReader
MathUtil
Matrix2D
Matrix3D
MatrixDisplay
MatrixNormalizer
MatrixRowStats
MatrixStats
MatrixUtil
MatrixWriter
MeanDifferenceMetaAnalysis
MeanVarianceEstimator
MedicOntologyService
MetaAnalysis
ModeratedTstat
MouseDevelopmentOntologyService
MultipleTestCorrection
NetUtils
NIFSTDOntologyService
NormalProbabilityComputer
ObiService
ObjectMatrix
ObjectMatrixImpl
ObjectProperty
ObjectPropertyImpl
OmimAnnotatorClient
OneWayAnovaResult
OntologyCardinalityRestriction
OntologyCardinalityRestriction.CardinalityType
OntologyCardinalityRestrictionImpl
OntologyClassRestriction
OntologyClassRestrictionImpl
OntologyDatatypeRestriction
OntologyDatatypeRestrictionImpl
OntologyIndexer
OntologyIndividual
OntologyIndividualImpl
OntologyLoader
OntologyProperty
OntologyPropertyImpl
OntologyResource
OntologyRestriction
OntologyRestrictionImpl
OntologySearch
OntologySearchException
OntologySearchJenaException
OntologyTerm
OntologyTermImpl
OntologyTermSimple
OntologyUtil
ParameterGrabber
ParamKeeper
ParamSpreadSheet
Point
PrecisionRecall
PrettyPrinter
PrimitiveMatrix
ProbabilityComputer
PropertyFactory
QRDecomposition
RandomChooser
Rank
RCDoubleMatrix1D
RClient
RConnectionFactory
RegressionTesting
RestrictionFactory
RetryWithoutWildcardFailedException
ROC
RowAbsentFilter
RowLevelFilter
RowMissingFilter
RowNameFilter
RServeClient
SearchIndex
SequenceOntologyService
SingularValueDecomposition
Smooth
SparseDoubleMatrix
SparseDoubleMatrixReader
SparseRaggedDoubleMatrix
SparseRaggedMatrixReader
SpecFunc
SpreadSheetFilter
SpreadSheetSchema
SQLUtils
Stats
StatusDebugLogger
StatusStderr
StatusViewer
StringConverter
StringDistance
StringMatrix
StringMatrixReader
StringToStringSetMap
StringUtil
TwoWayAnovaResult
UberonOntologyService
UndirectedGraphNode
UniformDensityComputer
UniformProbabilityComputer
UnitsOntologyService
Util
Visitable
Wilcoxon
Wishart