Package ubic.basecode.datafilter

Class RowNameFilter<M extends Matrix2D<R,C,V>,R,C,V>

java.lang.Object

ubic.basecode.datafilter.AbstractFilter<M,R,C,V>

ubic.basecode.datafilter.RowNameFilter<M,R,C,V>

All Implemented Interfaces:

Filter<M,R,C,V>

public class RowNameFilter<M extends Matrix2D<R,C,V>,R,C,V>
extends AbstractFilter<M,R,C,V>

Remove or retain rows that are on a list.

Author:

Paul Pavlidis

Field Summary

Fields inherited from class ubic.basecode.datafilter.AbstractFilter

log

Constructor Summary

Constructors

Constructor	Description
RowNameFilter()
RowNameFilter(Set<R> namesToFilter)
RowNameFilter(Set<R> namesToFilter, boolean exclude)

Method Summary

Modifier and Type	Method	Description
M	filter(M data)	Filter according to row names.
void	setFilterNames(Set<R> namesToFilter, boolean exclude)

Methods inherited from class ubic.basecode.datafilter.AbstractFilter

getOutputMatrix

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

RowNameFilter

public RowNameFilter()

RowNameFilter

public RowNameFilter(Set<R> namesToFilter)

Parameters:

namesToFilter -

RowNameFilter

public RowNameFilter(Set<R> namesToFilter,
                     boolean exclude)

Parameters:

namesToFilter -

exclude - Set to true if you want the list to indicate items to be skipped, rather than selected.

Method Detail

filter

public M filter(M data)

Filter according to row names.

Parameters:

data -

Returns:

setFilterNames

public void setFilterNames(Set<R> namesToFilter,
                           boolean exclude)