Package ubic.basecode.datafilter

Interface Summary

Interface	Description
Filter<M extends Matrix2D<R,C,V>,R,C,V>	An interface representing the functionality of a class that can filter 2-d matrix-based data by row-oriented criteria.

Class Summary

Class	Description
AbstractFilter<M extends Matrix2D<R,C,V>,R,C,V>	Base implementation of the filter interface.
AbstractLevelFilter<R,C>	Abstract class representing a filter that removes things from DoubleMatrixNamed matrices based on the values themselves.
AffymetrixProbeNameFilter<M extends Matrix2D<R,C,V>,R,C,V>	Remove probes that have names meeting certain rules indicating they may have low reliability.
ItemLevelFilter<R,C>	Filter that removes individual values that are outside of a range.
RowAbsentFilter<M extends Matrix2D<R,C,V>,R,C,V>	Filter a data matrix according to flags given in a separate matrix.
RowLevelFilter<R,C>	Remove rows from a matrix based on some row-based statistic.
RowMissingFilter<M extends Matrix2D<R,C,V>,R,C,V>	Remove rows from a matrix that are missing too many points.
RowNameFilter<M extends Matrix2D<R,C,V>,R,C,V>	Remove or retain rows that are on a list.