Package ubic.basecode.datafilter

Class AbstractFilter<M extends Matrix2D<R,C,V>,R,C,V>

java.lang.Object

ubic.basecode.datafilter.AbstractFilter<M,R,C,V>

All Implemented Interfaces:

Filter<M,R,C,V>

Direct Known Subclasses:

AbstractLevelFilter, AffymetrixProbeNameFilter, RowAbsentFilter, RowMissingFilter, RowNameFilter

public abstract class AbstractFilter<M extends Matrix2D<R,C,V>,R,C,V>
extends Object
implements Filter<M,R,C,V>

Base implementation of the filter interface. Subclasses must implement the filter() method.

Author:

Paul Pavlidis

Field Summary

Fields

Modifier and Type	Field	Description
protected static org.slf4j.Logger	log

Constructor Summary

Constructors

Constructor	Description
AbstractFilter()

Method Summary

Modifier and Type	Method	Description
protected M	getOutputMatrix(M data, int numRows, int numCols)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface ubic.basecode.datafilter.Filter

filter

Field Detail

log

protected static final org.slf4j.Logger log

Constructor Detail

AbstractFilter

public AbstractFilter()

Method Detail

getOutputMatrix

protected M getOutputMatrix(M data,
                            int numRows,
                            int numCols)