ubic.gemma.model.analysis

Class SingleExperimentAnalysis

java.lang.Object

ubic.gemma.model.common.AbstractDescribable

ubic.gemma.model.analysis.Analysis

ubic.gemma.model.analysis.expression.ExpressionAnalysis

ubic.gemma.model.analysis.SingleExperimentAnalysis

All Implemented Interfaces:

gemma.gsec.model.Securable, gemma.gsec.model.SecuredChild, Serializable, Describable, Identifiable

Direct Known Subclasses:

CoexpressionAnalysis, DifferentialExpressionAnalysis, PrincipalComponentAnalysis, SampleCoexpressionAnalysis

public abstract class SingleExperimentAnalysis
extends ExpressionAnalysis
implements gemma.gsec.model.SecuredChild

See Also:

Serialized Form

Constructor Summary

Constructors

Constructor and Description
SingleExperimentAnalysis()
SingleExperimentAnalysis(BioAssaySet experimentAnalyzed)

Method Summary

Modifier and Type	Method and Description
BioAssaySet	getExperimentAnalyzed()
Integer	getNumberOfElementsAnalyzed()
gemma.gsec.model.Securable	getSecurityOwner()
void	setExperimentAnalyzed(BioAssaySet experimentAnalyzed)
void	setNumberOfElementsAnalyzed(Integer numberOfElementsAnalyzed)

Methods inherited from class ubic.gemma.model.analysis.Analysis

getProtocol, setProtocol

Methods inherited from class ubic.gemma.model.common.AbstractDescribable

equals, getDescription, getId, getName, hashCode, setDescription, setId, setName, toString

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface gemma.gsec.model.Securable

getId

Constructor Detail

SingleExperimentAnalysis

public SingleExperimentAnalysis()

SingleExperimentAnalysis

public SingleExperimentAnalysis(BioAssaySet experimentAnalyzed)

Method Detail

getExperimentAnalyzed

public BioAssaySet getExperimentAnalyzed()

setExperimentAnalyzed

public void setExperimentAnalyzed(BioAssaySet experimentAnalyzed)

getNumberOfElementsAnalyzed

public Integer getNumberOfElementsAnalyzed()

Returns:

The number of probes or genes (or other elements) used in the analysis. The exact meaning is determined by the subclass + implementation.

setNumberOfElementsAnalyzed

public void setNumberOfElementsAnalyzed(Integer numberOfElementsAnalyzed)

getSecurityOwner

public gemma.gsec.model.Securable getSecurityOwner()

Specified by:

getSecurityOwner in interface gemma.gsec.model.SecuredChild