Uses of Interface
ubic.gemma.core.apps.Blat

Packages that use Blat

Package	Description
ubic.gemma.core.apps
ubic.gemma.core.loader.expression.arrayDesign

Uses of Blat in ubic.gemma.core.apps

Classes in ubic.gemma.core.apps that implement Blat

Modifier and Type	Class and Description
class	ShellDelegatingBlat Class to manage the gfServer and run BLAT searches.

Uses of Blat in ubic.gemma.core.loader.expression.arrayDesign

Methods in ubic.gemma.core.loader.expression.arrayDesign with parameters of type Blat

Modifier and Type	Method and Description
Collection<BlatResult>	ArrayDesignSequenceAlignmentServiceImpl.processArrayDesign(ArrayDesign design, Blat blat)
Collection<BlatResult>	ArrayDesignSequenceAlignmentService.processArrayDesign(ArrayDesign ad, Blat blat)