Uses of Interface
ubic.basecode.ontology.model.OntologyIndividual

Packages that use OntologyIndividual

Package	Description
ubic.basecode.ontology.jena	Implementation of OntologyService using Apache Jena.
ubic.basecode.ontology.model
ubic.basecode.ontology.providers	This package contains baseCode built-in ontologies and a GenericOntologyService to implement your own ontologies.
ubic.basecode.ontology.simple	Simple ontology implementation.

Uses of OntologyIndividual in ubic.basecode.ontology.jena

Methods in ubic.basecode.ontology.jena that return types with arguments of type OntologyIndividual

Modifier and Type	Method	Description
Collection<OntologySearchResult<OntologyIndividual>>	AbstractOntologyService.findIndividuals(String search, int maxResults, boolean keepObsoletes)
Collection<OntologyIndividual>	AbstractOntologyService.getTermIndividuals(String uri)

Uses of OntologyIndividual in ubic.basecode.ontology.model

Methods in ubic.basecode.ontology.model that return types with arguments of type OntologyIndividual

Modifier and Type	Method	Description
default Collection<OntologyIndividual>	OntologyTerm.getIndividuals()
Collection<OntologyIndividual>	OntologyTerm.getIndividuals(boolean direct)

Uses of OntologyIndividual in ubic.basecode.ontology.providers

Methods in ubic.basecode.ontology.providers that return types with arguments of type OntologyIndividual

Modifier and Type	Method	Description
Collection<OntologySearchResult<OntologyIndividual>>	AbstractDelegatingOntologyService.findIndividuals(String search, int maxResults, boolean keepObsoletes)
default Collection<OntologySearchResult<OntologyIndividual>>	OntologyService.findIndividuals(String search, int maxResults)	Looks for any individuals that match the given search string.
Collection<OntologySearchResult<OntologyIndividual>>	OntologyService.findIndividuals(String search, int maxResults, boolean keepObsoletes)	Looks for any individuals that match the given search string.
Collection<OntologyIndividual>	AbstractDelegatingOntologyService.getTermIndividuals(String uri)
Collection<OntologyIndividual>	OntologyService.getTermIndividuals(String uri)	Obtain all the individuals for a given term URI.

Uses of OntologyIndividual in ubic.basecode.ontology.simple

Classes in ubic.basecode.ontology.simple that implement OntologyIndividual

Modifier and Type	Class	Description
class	OntologyIndividualSimple

Methods in ubic.basecode.ontology.simple that return types with arguments of type OntologyIndividual

Modifier and Type	Method	Description
Collection<OntologyIndividual>	OntologyTermSimple.getIndividuals(boolean direct)