public class Gene extends Object implements Comparable<Gene>
Constructor and Description |
---|
Gene(String symbol) |
Gene(String symbol,
String name) |
Modifier and Type | Method and Description |
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boolean |
addGeneSet(GeneSetTerm t)
Updates membership (for probes too).
|
protected void |
addProbe(Probe probe) |
int |
compareTo(Gene o) |
boolean |
equals(Object obj) |
Collection<Probe> |
getActiveProbes() |
Long |
getGemmaID() |
Collection<GeneSetTerm> |
getGeneSets() |
String |
getName() |
Integer |
getNcbiId() |
Integer |
getNcbiTaxonId() |
Collection<Probe> |
getProbes() |
String |
getSymbol() |
int |
hashCode() |
boolean |
removeGeneSet(GeneSetTerm t) |
void |
setActiveProbes(Collection<Probe> activeProbes) |
void |
setGemmaId(Long id) |
void |
setGeneSets(Collection<GeneSetTerm> geneSets) |
void |
setNcbiId(Integer ncbiId) |
void |
setNcbiTaxonId(Integer ncbiTaxonId) |
void |
setProbes(Collection<Probe> probes) |
String |
toString() |
public boolean addGeneSet(GeneSetTerm t)
t
- public int compareTo(Gene o)
compareTo
in interface Comparable<Gene>
public Collection<Probe> getActiveProbes()
public Long getGemmaID()
public Collection<GeneSetTerm> getGeneSets()
public String getName()
public Integer getNcbiId()
public Integer getNcbiTaxonId()
public Collection<Probe> getProbes()
public String getSymbol()
public boolean removeGeneSet(GeneSetTerm t)
t
- public void setActiveProbes(Collection<Probe> activeProbes)
public void setGemmaId(Long id)
public void setGeneSets(Collection<GeneSetTerm> geneSets)
public void setNcbiId(Integer ncbiId)
public void setNcbiTaxonId(Integer ncbiTaxonId)
public void setProbes(Collection<Probe> probes)
protected void addProbe(Probe probe)
probe
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