Class ExperimentalDesignWriter

java.lang.Object

ubic.gemma.core.datastructure.matrix.io.ExperimentalDesignWriter

public class ExperimentalDesignWriter
extends Object

Output compatible with ExperimentalDesignImporterImpl.

Author:

keshav

See Also:

• ExperimentalDesignImporterImpl

Constructor Summary

Constructors

Constructor	Description
ExperimentalDesignWriter(EntityUrlBuilder entityUrlBuilder, BuildInfo buildInfo, boolean autoFlush)

Method Summary

Modifier and Type	Method	Description
void	write(Writer writer, ExpressionExperiment ee, Collection<BioAssay> bioAssays, boolean writeBaseHeader, boolean writeHeader)
void	write(ExpressionExperiment ee, boolean writeHeader, Writer writer)

Methods inherited from class Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Details

ExperimentalDesignWriter

public ExperimentalDesignWriter(EntityUrlBuilder entityUrlBuilder,
 BuildInfo buildInfo,
 boolean autoFlush)

Method Details

write

public void write(ExpressionExperiment ee,
 boolean writeHeader,
 Writer writer)
           throws IOException

Parameters:

ee - ee

writeHeader - writer header

writer - writer

Throws:

IOException - when the write failed

write

public void write(Writer writer,
 ExpressionExperiment ee,
 Collection<BioAssay> bioAssays,
 boolean writeBaseHeader,
 boolean writeHeader)
           throws IOException

Parameters:

writer - writer

ee - ee

bioAssays - bas

writeBaseHeader - comments

writeHeader - column names

Throws:

IOException - when the write failed