All Classes
- AbstractGemmaEndpoint
- AbstractSetListContainer
- AnchorTagUtil
- AnnotationController
- ArrayDesignAddCommand
- ArrayDesignController
- ArrayDesignControllerImpl
- ArrayDesignFormController
- ArrayDesignGroupingTag
- ArrayDesignHtmlUtil
- ArrayDesignIdentifierByNameEndpoint
- ArrayDesignProbeMapperController
- ArrayDesignPropertyEditor
- ArrayDesignRepeatScanController
- ArrayDesignRepeatScanTask
- ArrayDesignRepeatScanTaskCommand
- ArrayDesignRepeatScanTaskImpl
- ArrayDesignUsedEndpoint
- ArrayDesignValueObjectExt
- AssayViewTag
- AuditController
- BaseController
- BaseFormController
- BatchInfoFetchController
- BibliographicReferenceController
- BibliographicReferenceControllerImpl
- BioAssayController
- BioMaterialController
- BlatResultTrackController
- CacheMonitor
- CacheMonitorImpl
- CharacteristicBrowserController
- CharacteristicConverter
- ClassConverter
- ClientAbortExceptionResolver
- CoexpressionSearchController
- CoexSearchTaskCommand
- CommonsMultipartFile
- CommonsMultipartMonitoredResolver
- CompositeSequenceController
- ConfigurationCookie
- Constants
- ConstantsTag
- ConstantsTei
- ControllerUtils
- CustomRssViewer
- DatabaseEntryTag
- DEDVController
- DEDVfromEEIDGeneIDEndpoint
- DEDVRankEndpoint
- DesignMatrixRowValueObject
- DesignMatrixRowValueObject.Factory
- DifferentialExpressionAnalysisController
- DifferentialExpressionAnalyzerInfo
- DifferentialExpressionProbeResultEndpoint
- DifferentialExpressionSearchController
- DiffExMetaAnalyzerController
- DiffExpressionSearchCommand
- DirectionConverter
- DoublePointConverter
- Ee2AdUpdateJob
- Ee2cUpdateJob
- EmptyController
- EntityDelegator
- EntityNotFoundException
- ExceptionTag
- ExperimentalDesignController
- ExperimentalFactorValueWebUIObject
- ExperimentAnnotationEndpoint
- ExperimentDEDVEndpoint
- ExperimentIDbyTaxonEndpoint
- ExperimentIdEndpoint
- ExperimentNameEndpoint
- ExperimentNumSamplesEndpoint
- ExperimentQCTag
- ExperimentSetListContainer
- ExpressionDataFileUploadController
- ExpressionExperimentController
- ExpressionExperimentDataFetchCommand
- ExpressionExperimentDataFetchController
- ExpressionExperimentEditValueObject
- ExpressionExperimentExperimentalFactorValueObject
- ExpressionExperimentFormController
- ExpressionExperimentLoadController
- ExpressionExperimentQCController
- ExpressionExperimentQCUtils
- ExpressionExperimentReportGenerationController
- ExpressionExperimentSetController
- ExpressionExperimentSetIDsEndpoint
- ExpressionExperimentUploadResponse
- ExpressionExperimentVisualizationCommand
- ExpressionProfileDataObject
- FactorProfile
- FailedMultipartHttpServletRequest
- FeedReader
- FileUpload
- FileUploadController
- FileUploadUtil
- GemmaClassicHomePageController
- Gene2GOdescriptionEndpoint
- Gene2GoTermEndpoint
- Gene2ProbeEndpoint
- GeneByNCBIIdEndpoint
- GeneCoexpressionEndpoint
- GeneCoexpressionSearchEndpoint
- GeneController
- GeneDetailsByGeneIDEndpoint
- GeneExpressionProfile
- GeneIDbyTaxonEndpoint
- GeneIdEndpoint
- GeneNameEndpoint
- GeneOverlapEndpoint
- GenePickerController
- GeneralSearchController
- GeneralSearchController.SearchResultValueObject
- GeneralSearchControllerImpl
- GeneSetController
- GeneSetListContainer
- GeneSymbolComparator
- GeoRecordBrowserController
- GOEvidenceCodeConverter
- GoTerm2GeneEndpoint
- HibernateMonitor
- HibernateMonitorImpl
- HomePageController
- IndexController
- JavascriptLogger
- JsonReaderResponse
- JSONTableRenderer
- JsonUtil
- JSONView
- LabelValue
- LinkAnalysisController
- ListBatchCommand
- MaintenanceModeController
- ManualAuthenticationServiceBasedSecurityContextFactory
- MessageUtil
- MessageUtilImpl
- MetaFile
- MeterRegistryWebConfigurer
- MinifierPostProcessor
- MonitoredDiskFileItem
- MonitoredDiskFileItemFactory
- MonitoredOutputStream
- NewsItem
- OntologyController
- OutputStreamListener
- PhenotypeController
- PreprocessController
- Probe2GeneEndpoint
- ProgressStatusService
- ProgressStatusServiceImpl
- PubMedQueryController
- PubMedQueryControllerImpl
- PubMedSearchCommand
- QuantitationTypePropertyEditor
- ReCaptcha
- ReCaptchaException
- ReCaptchaResponse
- RequestUtil
- RssFeedController
- ScaleTypeConverter
- SecureMethodInvokingJobDetailFactoryBean
- SecureQuartzJobBean
- SecurityController
- SecurityControllerImpl
- SecurityInfoValueObject
- SequenceTypePropertyEditor
- ServiceUnavailableException
- ServletMetricsFilter
- SessionListManager
- SessionListManagerImpl
- ShortBibliographicReferenceTag
- SidValueObject
- SignupController
- SimpleExpressionExperimentCommandValidation
- SimpleExpressionExperimentLoadTaskCommand
- SimpleHttp
- SimplePageContext
- SlackAppender
- StandardQuantitationTypeConverter
- StartupListener
- StringPoint
- SvdController
- SystemMonitorController
- SystemStatsController
- TaskCompletionController
- TaxonPropertyEditor
- TextView
- TwoChannelMissingValueController
- UnhandledExceptionResolver
- UploadInfo
- UploadListener
- UserCounterListener
- UserFormMultiActionController
- UserGroupValueObject
- UserListController
- UserListControllerImpl
- UserTracker
- UserUpdateCommand
- UserValueObject
- VisualizationValueObject
- WebConstants
- WhatsNewController
- XmlView