Package ubic.gemma.persistence.service.expression.bioAssayData

Class AbstractDesignElementDataVectorService<T extends DesignElementDataVector>

java.lang.Object

ubic.gemma.persistence.service.AbstractService<T>

ubic.gemma.persistence.service.expression.bioAssayData.AbstractDesignElementDataVectorService<T>

All Implemented Interfaces:

BaseImmutableService<T>, BaseReadOnlyService<T>, BaseService<T>

Direct Known Subclasses:

ProcessedExpressionDataVectorServiceImpl, RawAndProcessedExpressionDataVectorServiceImpl, RawExpressionDataVectorServiceImpl

public abstract class AbstractDesignElementDataVectorService<T extends DesignElementDataVector>
extends AbstractService<T>

Field Summary

Fields inherited from class ubic.gemma.persistence.service.AbstractService

log

Constructor Summary

Constructors

Modifier	Constructor	Description
protected	AbstractDesignElementDataVectorService(DesignElementDataVectorDao<T> mainDao)

Method Summary

Modifier and Type	Method	Description
Collection<T>	find(Collection<QuantitationType> quantitationTypes)
Collection<T>	find(QuantitationType quantitationType)
Collection<T>	find(BioAssayDimension bioAssayDimension)
Collection<T>	findAndThaw(Collection<QuantitationType> quantitationTypes)
Collection<T>	findAndThaw(QuantitationType qt)
Collection<T>	findAndThaw(BioAssayDimension bioAssayDimension)
Collection<T>	thaw(Collection<T> vectors)

Methods inherited from class ubic.gemma.persistence.service.AbstractService

countAll, create, create, ensureInSession, ensureInSession, find, findOrCreate, findOrFail, getElementClass, load, load, loadAll, loadOrFail, loadOrFail, loadOrFail, remove, remove, remove, save, save, update, update

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Methods inherited from interface ubic.gemma.persistence.service.BaseReadOnlyService

countAll, find, findOrFail, getElementClass, load, load, loadAll, loadOrFail, loadOrFail, loadOrFail

Constructor Detail

AbstractDesignElementDataVectorService

protected AbstractDesignElementDataVectorService(DesignElementDataVectorDao<T> mainDao)

Method Detail

find

@Transactional(readOnly=true)
public Collection<T> find(BioAssayDimension bioAssayDimension)

findAndThaw

@Transactional(readOnly=true)
public Collection<T> findAndThaw(BioAssayDimension bioAssayDimension)

find

@Transactional(readOnly=true)
public Collection<T> find(Collection<QuantitationType> quantitationTypes)

findAndThaw

@Transactional(readOnly=true)
public Collection<T> findAndThaw(Collection<QuantitationType> quantitationTypes)

find

@Transactional(readOnly=true)
public Collection<T> find(QuantitationType quantitationType)

findAndThaw

@Transactional(readOnly=true)
public Collection<T> findAndThaw(QuantitationType qt)

thaw

@Transactional(readOnly=true)
public Collection<T> thaw(Collection<T> vectors)