Interface SingleExperimentAnalysisDao<T extends SingleExperimentAnalysis>
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- All Superinterfaces:
AnalysisDao<T>
,BaseDao<T>
- All Known Subinterfaces:
CoexpressionAnalysisDao
,DifferentialExpressionAnalysisDao
- All Known Implementing Classes:
CoexpressionAnalysisDaoImpl
,SingleExperimentAnalysisDaoBase
public interface SingleExperimentAnalysisDao<T extends SingleExperimentAnalysis> extends AnalysisDao<T>
- Author:
- poirigui
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Method Summary
All Methods Instance Methods Abstract Methods Modifier and Type Method Description Collection<T>
findByExperiment(BioAssaySet experiment)
Find by associated experiment viaSingleExperimentAnalysis.getExperimentAnalyzed()
.Map<BioAssaySet,Collection<T>>
findByExperiments(Collection<? extends BioAssaySet> experiments)
Given a collection of experiments returns a Map of Analysis --> collection of Experiments The collection of investigations returned by the map will include all the investigations for the analysis key iff one of the investigations for that analysis was in the given collection started with-
Methods inherited from interface ubic.gemma.persistence.service.analysis.AnalysisDao
existsByExperiment, findByName, findByTaxon
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Methods inherited from interface ubic.gemma.persistence.service.BaseDao
countAll, create, create, find, findOrCreate, getElementClass, getIdentifierPropertyName, load, load, loadAll, loadReference, loadReference, remove, remove, remove, save, save, update, update
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Method Detail
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findByExperiment
Collection<T> findByExperiment(BioAssaySet experiment)
Find by associated experiment viaSingleExperimentAnalysis.getExperimentAnalyzed()
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findByExperiments
Map<BioAssaySet,Collection<T>> findByExperiments(Collection<? extends BioAssaySet> experiments)
Given a collection of experiments returns a Map of Analysis --> collection of Experiments The collection of investigations returned by the map will include all the investigations for the analysis key iff one of the investigations for that analysis was in the given collection started with- Parameters:
experiments
- experiments- Returns:
- map to analyses
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