Package ubic.gemma.web.controller.expression.experiment

Interface Summary

Interface	Description
ExperimentalDesignController	Note: do not use parametrized collections as parameters for ajax methods in this class! Type information is lost during proxy creation so DWR can't figure out what type of collection the method should take.

Class Summary

Class	Description
AnnotationController	Controller for methods involving annotation of experiments (and potentially other things); delegates to OntologyService and the CharacteristicService.
DEDVController	Exposes methods for accessing underlying Design Element Data Vectors.
DesignMatrixRowValueObject	For the display of a summary table about experimental design.
DesignMatrixRowValueObject.Factory
ExperimentalDesignControllerImpl	Main entry point to editing and viewing experimental designs.
ExpressionDataFileUploadController	Replaces SimpleExpressionExperimentLoadController
ExpressionExperimentController
ExpressionExperimentDataFetchCommand
ExpressionExperimentDataFetchController	For the download of data files from the browser.
ExpressionExperimentEditValueObject
ExpressionExperimentExperimentalFactorValueObject
ExpressionExperimentFormController	Handle editing of expression experiments.
ExpressionExperimentLoadController	Handles loading of Expression data into the system when the source is GEO or ArrayExpress, via Spring MVC or AJAX, either in the webapp or in a javaspaces grid.
ExpressionExperimentQCController
ExpressionExperimentQCUtils	Helper functions for checking existence etc.
ExpressionExperimentSetController	For fetching and manipulating ExpressionExperimentSets.
ExpressionExperimentUploadResponse
GeoRecordBrowserController
MetaFile	Wrapper for metadata file information for the frontend
SimpleExpressionExperimentCommandValidation	Stores information about the validation status of an attempted expression experiment load.
SimpleExpressionExperimentLoadTaskCommand	Extends a SimpleExpressionExperimentMetaData with information about the file