ubic.gemma.model.expression.experiment

Class ExpressionExperimentSubSet

java.lang.Object

ubic.gemma.model.common.AbstractDescribable

ubic.gemma.model.common.AbstractAuditable

ubic.gemma.model.analysis.Investigation

ubic.gemma.model.expression.experiment.BioAssaySet

ubic.gemma.model.expression.experiment.ExpressionExperimentSubSet

All Implemented Interfaces:

gemma.gsec.model.Securable, gemma.gsec.model.SecuredChild, Serializable, Auditable, Describable, Identifiable

public class ExpressionExperimentSubSet
extends BioAssaySet
implements gemma.gsec.model.SecuredChild

A subset of samples from an ExpressionExperiment

See Also:

Serialized Form

Nested Class Summary

Nested Classes

Modifier and Type	Class and Description
static class	ExpressionExperimentSubSet.Factory

Constructor Summary

Constructors

Constructor and Description
ExpressionExperimentSubSet() No-arg constructor added to satisfy javabean contract

Method Summary

Modifier and Type	Method and Description
ExpressionExperimentValueObject	createValueObject() Special use case.
gemma.gsec.model.Securable	getSecurityOwner()
ExpressionExperiment	getSourceExperiment()
void	setSourceExperiment(ExpressionExperiment sourceExperiment)

Methods inherited from class ubic.gemma.model.expression.experiment.BioAssaySet

getAccession, getBioAssays, setAccession, setBioAssays

Methods inherited from class ubic.gemma.model.analysis.Investigation

getCharacteristics, getOtherRelevantPublications, getOwner, getPrimaryPublication, setCharacteristics, setOtherRelevantPublications, setOwner, setPrimaryPublication

Methods inherited from class ubic.gemma.model.common.AbstractAuditable

getAuditTrail, setAuditTrail

Methods inherited from class ubic.gemma.model.common.AbstractDescribable

equals, getDescription, getId, getName, hashCode, setDescription, setId, setName, toString

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface gemma.gsec.model.Securable

getId

Methods inherited from interface ubic.gemma.model.common.Identifiable

getId

Constructor Detail

ExpressionExperimentSubSet

public ExpressionExperimentSubSet()

No-arg constructor added to satisfy javabean contract

Method Detail

createValueObject

public ExpressionExperimentValueObject createValueObject()

Description copied from class: BioAssaySet

Special use case. Use a constructor of the desired VO instead, or the loadValueObject() in all VO-Enabled services.

Specified by:

createValueObject in class BioAssaySet

Returns:

an expression experiment value object.

getSecurityOwner

public gemma.gsec.model.Securable getSecurityOwner()

Specified by:

getSecurityOwner in interface gemma.gsec.model.SecuredChild

getSourceExperiment

public ExpressionExperiment getSourceExperiment()

setSourceExperiment

public void setSourceExperiment(ExpressionExperiment sourceExperiment)