Package ubic.basecode.ontology.providers

Class SequenceOntologyService

java.lang.Object

ubic.basecode.ontology.providers.AbstractDelegatingOntologyService

ubic.basecode.ontology.providers.AbstractBaseCodeOntologyService

ubic.basecode.ontology.providers.SequenceOntologyService

All Implemented Interfaces:

AutoCloseable, OntologyService

public class SequenceOntologyService
extends AbstractBaseCodeOntologyService

Sequence types and features ontology

Author:

Paul

Nested Class Summary

Nested classes/interfaces inherited from interface ubic.basecode.ontology.providers.OntologyService

OntologyService.InferenceMode, OntologyService.LanguageLevel

Constructor Summary

Constructors

Constructor	Description
SequenceOntologyService()

Method Summary

Methods inherited from class ubic.basecode.ontology.providers.AbstractDelegatingOntologyService

cancelInitializationThread, close, findIndividuals, findResources, findTerm, findUsingAlternativeId, getAdditionalPropertyUris, getAllURIs, getChildren, getDescription, getExcludedWordsFromStemming, getInferenceMode, getLanguageLevel, getName, getParents, getProcessImports, getResource, getTerm, getTermIndividuals, index, initialize, initialize, isEnabled, isInitializationThreadAlive, isInitializationThreadCancelled, isOntologyLoaded, isSearchEnabled, loadTermsInNameSpace, setAdditionalPropertyUris, setExcludedWordsFromStemming, setInferenceMode, setLanguageLevel, setProcessImports, setSearchEnabled, startInitializationThread, toString, waitForInitializationThread

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface ubic.basecode.ontology.providers.OntologyService

findIndividuals, findResources, findTerm, getChildren, getParents

Constructor Details

SequenceOntologyService

public SequenceOntologyService()