Package ubic.basecode.datafilter


package ubic.basecode.datafilter
  • Class
    Description
    AbstractFilter<M extends Matrix2D<R,C,V>,R,C,V>
    Base implementation of the filter interface.
    Abstract class representing a filter that removes things from DoubleMatrixNamed matrices based on the values themselves.
    AffymetrixProbeNameFilter<M extends Matrix2D<R,C,V>,R,C,V>
    Remove probes that have names meeting certain rules indicating they may have low reliability.
    Filter<M extends Matrix2D<R,C,V>,R,C,V>
    An interface representing the functionality of a class that can filter 2-d matrix-based data by row-oriented criteria.
    Filter that removes individual values that are outside of a range.
    RowAbsentFilter<M extends Matrix2D<R,C,V>,R,C,V>
    Filter a data matrix according to flags given in a separate matrix.
    Remove rows from a matrix based on some row-based statistic.
    RowMissingFilter<M extends Matrix2D<R,C,V>,R,C,V>
    Remove rows from a matrix that are missing too many points.
    RowNameFilter<M extends Matrix2D<R,C,V>,R,C,V>
    Remove or retain rows that are on a list.