@ParametersAreNonnullByDefault
Package ubic.basecode.ontology.providers
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Interface Summary Interface Description OntologyService -
Class Summary Class Description CellLineOntologyService See http://www.obofoundry.org/cgi-bin/detail.cgi?id=CLOCellTypeOntologyService See http://www.obofoundry.org/cgi-bin/detail.cgi?id=cellChebiOntologyService Loads the CHEBI Ontology at startup in its own thread.DiseaseOntologyService Holds a copy of the Disease Ontology.ExperimentalFactorOntologyService FMAOntologyService Holds a copy of the FMA Ontology on disk.GenericOntologyService A way to create ad hoc ontology services (in memory) for testingHumanDevelopmentOntologyService HumanPhenotypeOntologyService See http://bioportal.bioontology.org/ontologies/45774?p=terms&conceptid=HP%3A0001264 for example.MammalianPhenotypeOntologyService MedicOntologyService MEDIC ONTOLOGY USED BY PHENOCARTA, its represents MESH terms as a tree so with can use the parent structure that a normal mesh term doesnt haveMouseDevelopmentOntologyService NIFSTDOntologyService ObiService SequenceOntologyService Support for the Sequence OntologyUberonOntologyService UberonUnitsOntologyService Support for the units ontology -
Enum Summary Enum Description OntologyService.InferenceMode OntologyService.LanguageLevel