Uses of Class
ubic.basecode.math.linearmodels.LinearModelSummary

Packages that use LinearModelSummary

Package	Description
ubic.basecode.math.linearmodels
ubic.basecode.util.r

Uses of LinearModelSummary in ubic.basecode.math.linearmodels

Methods in ubic.basecode.math.linearmodels that return LinearModelSummary

Modifier and Type	Method and Description
protected LinearModelSummary	LeastSquaresFit.summarize(int i) Compute and organize the various summary statistics for a fit.

Methods in ubic.basecode.math.linearmodels that return types with arguments of type LinearModelSummary

Modifier and Type	Method and Description
List<LinearModelSummary>	LeastSquaresFit.summarize()
List<LinearModelSummary>	LeastSquaresFit.summarize(boolean anova)
Map<String,LinearModelSummary>	LeastSquaresFit.summarizeByKeys(boolean anova)

Uses of LinearModelSummary in ubic.basecode.util.r

Methods in ubic.basecode.util.r that return LinearModelSummary

Modifier and Type	Method and Description
LinearModelSummary	RClient.linearModel(double[] data, Map<String,List<?>> factors) Lower level access to linear model.
LinearModelSummary	AbstractRClient.linearModel(double[] data, Map<String,List<?>> factors)
LinearModelSummary	RClient.linearModel(double[] data, ObjectMatrix<String,String,Object> design)
LinearModelSummary	AbstractRClient.linearModel(double[] data, ObjectMatrix<String,String,Object> d)

Methods in ubic.basecode.util.r that return types with arguments of type LinearModelSummary

Modifier and Type	Method and Description
Map<String,LinearModelSummary>	RClient.rowApplyLinearModel(String dataMatrixVarName, String modelFormula, String[] factorNames) Run lm with anova on all the rows of a matrix
Map<String,LinearModelSummary>	AbstractRClient.rowApplyLinearModel(String dataMatrixVarName, String modelFormula, String[] factorNames)