Package ubic.basecode.ontology.ncbo

Class AnnotatorResponse

java.lang.Object

ubic.basecode.ontology.ncbo.AnnotatorResponse

All Implemented Interfaces:

Comparable<AnnotatorResponse>

public class AnnotatorResponse
extends Object
implements Comparable<AnnotatorResponse>

This represents an Ontology terms returned by the AnnotatorClient

Constructor Summary

Constructors

Constructor	Description
AnnotatorResponse(String valueUri, String matchType, String txtMatched, Integer indexFrom, Integer indexTo, String ontologyUsed, String searchQueryUsed)

Method Summary

Modifier and Type	Method	Description
int	compareTo(AnnotatorResponse annotatorResponse)
boolean	equals(Object obj)
String	findCondition(boolean modifiedSearch)
Integer	getIndexFrom()
Integer	getIndexTo()
String	getMatchType()
String	getOntologyUsed()
String	getSearchQueryUsed()
String	getTxtMatched()
String	getValueUri()
int	hashCode()
boolean	isDiseaseUsed()
boolean	isExactMatch()
boolean	isExactSynonym()
boolean	isHpUsed()
void	setExactMatch(boolean exactMatch)
void	setExactSynonym(boolean exactSynonym)
void	setIndexFrom(Integer indexFrom)
void	setIndexTo(Integer indexTo)
void	setMatchType(String matchType)
void	setOntologyUsed(String ontologyUsed)
void	setSearchQueryUsed(String searchQueryUsed)
void	setTxtMatched(String txtMatched)
void	setValueUri(String valueUri)
String	toString()

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Detail

AnnotatorResponse

public AnnotatorResponse(String valueUri,
                         String matchType,
                         String txtMatched,
                         Integer indexFrom,
                         Integer indexTo,
                         String ontologyUsed,
                         String searchQueryUsed)

Method Detail

toString

public String toString()

Overrides:

toString in class Object

compareTo

public int compareTo(AnnotatorResponse annotatorResponse)

Specified by:

compareTo in interface Comparable<AnnotatorResponse>

isDiseaseUsed

public boolean isDiseaseUsed()

isHpUsed

public boolean isHpUsed()

getValueUri

public String getValueUri()

setValueUri

public void setValueUri(String valueUri)

getMatchType

public String getMatchType()

setMatchType

public void setMatchType(String matchType)

getTxtMatched

public String getTxtMatched()

setTxtMatched

public void setTxtMatched(String txtMatched)

getIndexFrom

public Integer getIndexFrom()

setIndexFrom

public void setIndexFrom(Integer indexFrom)

getIndexTo

public Integer getIndexTo()

setIndexTo

public void setIndexTo(Integer indexTo)

getOntologyUsed

public String getOntologyUsed()

setOntologyUsed

public void setOntologyUsed(String ontologyUsed)

getSearchQueryUsed

public String getSearchQueryUsed()

setSearchQueryUsed

public void setSearchQueryUsed(String searchQueryUsed)

isExactSynonym

public boolean isExactSynonym()

setExactSynonym

public void setExactSynonym(boolean exactSynonym)

isExactMatch

public boolean isExactMatch()

setExactMatch

public void setExactMatch(boolean exactMatch)

hashCode

public int hashCode()

Overrides:

hashCode in class Object

equals

public boolean equals(Object obj)

Overrides:

equals in class Object

findCondition

public String findCondition(boolean modifiedSearch)