CorrelationStatsTest (baseCode 1.1.11 Test API)

java.lang.Object
- ubic.basecode.math.CorrelationStatsTest

```
public class CorrelationStatsTest
extends Object
```
Most benchmarks come from R, using things like cor.test(rnorm(50), rnorm(50), method="spearman", alternative="two.sided"),
OR (where the first argument is n, second is S (rounded off)
```
 1-.C("prho",as.integer(10),as.double(4),double(1),integer(1),as.logical(FALSE),PACKAGE="stats")[[3]]
 
```
Author:

paul

Constructor Summary

Constructors
Constructor and Description

CorrelationStatsTest()

Constructors
Constructor and Description
`CorrelationStatsTest()`

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method and Description
`void`	`testCorrel()`
`void`	`testCorrelAsByte()`
`void`	`testCorrelationForPvalue()`
`void`	`testCorrelTooSmall()`
`void`	`testInverseFisherTransform()`
`void`	`testPvalue()`
`void`	`testSpearmanPvalueA()`
`void`	`testSpearmanPvalueA2()`
`void`	`testSpearmanPvalueB()`
`void`	`testSpearmanPvalueD()`
`void`	`testSpearmanPvalueD2()`
`void`	`testSpearmanPvalueE()`
`void`	`testSpearmanPvalueEh()`
`void`	`testSpearmanPvalueEm()`
`void`	`testSpearmanPvalueF()`
`void`	`testSpearmanPvalueG()`
`void`	`testSpearmanPvalueG2()`
`void`	`testSpearmanPvalueTDist()`

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail
- CorrelationStatsTest
```
public CorrelationStatsTest()
```

Method Detail

testCorrel
```
public void testCorrel()
```

testCorrelAsByte
```
public void testCorrelAsByte()
```

testCorrelationForPvalue

public void testCorrelationForPvalue()

testCorrelTooSmall
```
public void testCorrelTooSmall()
```

testInverseFisherTransform

public void testInverseFisherTransform()

testPvalue
```
public void testPvalue()
```

testSpearmanPvalueA
```
public void testSpearmanPvalueA()
```

testSpearmanPvalueA2
```
public void testSpearmanPvalueA2()
```

testSpearmanPvalueB
```
public void testSpearmanPvalueB()
```

testSpearmanPvalueD
```
public void testSpearmanPvalueD()
```

testSpearmanPvalueD2
```
public void testSpearmanPvalueD2()
```

testSpearmanPvalueE
```
public void testSpearmanPvalueE()
```

testSpearmanPvalueEh
```
public void testSpearmanPvalueEh()
```

testSpearmanPvalueEm
```
public void testSpearmanPvalueEm()
```

testSpearmanPvalueF
```
public void testSpearmanPvalueF()
```

testSpearmanPvalueG
```
public void testSpearmanPvalueG()
```

testSpearmanPvalueG2
```
public void testSpearmanPvalueG2()
```

testSpearmanPvalueTDist
```
public void testSpearmanPvalueTDist()
```

Class CorrelationStatsTest

Constructor Summary

Method Summary

Methods inherited from class java.lang.Object

Constructor Detail

CorrelationStatsTest

Method Detail

testCorrel

testCorrelAsByte

testCorrelationForPvalue

testCorrelTooSmall

testInverseFisherTransform

testPvalue

testSpearmanPvalueA

testSpearmanPvalueA2

testSpearmanPvalueB

testSpearmanPvalueD

testSpearmanPvalueD2

testSpearmanPvalueE

testSpearmanPvalueEh

testSpearmanPvalueEm

testSpearmanPvalueF

testSpearmanPvalueG

testSpearmanPvalueG2

testSpearmanPvalueTDist