ubic.erminej.gui.geneset.table

Class GeneSetTableModel

java.lang.Object

javax.swing.table.AbstractTableModel

ubic.erminej.gui.geneset.table.GeneSetTableModel

All Implemented Interfaces:

Serializable, TableModel

public class GeneSetTableModel
extends AbstractTableModel

Model for displaying list of gene sets and results in the main frame.

Version:

$Id: GeneSetTableModel.java,v 1.36 2013/05/15 23:38:46 paul Exp $

Author:

pavlidis

See Also:

for model used for displaying the genes in a single gene set., Serialized Form

Field Summary

Fields

Modifier and Type	Field and Description
static int	INIT_COLUMNS The number of columns that are always there, before runs are listed.

Fields inherited from class javax.swing.table.AbstractTableModel

listenerList

Constructor Summary

Constructors

Constructor and Description
GeneSetTableModel(GeneAnnotations geneData, List<GeneSetPvalRun> results)

Method Summary

Methods

Modifier and Type	Method and Description
void	addRun()
void	filter()
void	fireTableDataChanged()
Class<?>	getColumnClass(int columnIndex)
int	getColumnCount()
int	getColumnIndexForRun(int runIndex)
String	getColumnName(int column)
int	getRowCount()
int	getRunIndex(int columnNumber)
Object	getValueAt(int rowIndex, int colIndex)
void	removeRunData(int runIndex)
void	renameRun(int runIndex, String newName)
void	setFilterEmpty(boolean b)
void	setFilterEmptyResults(boolean b)
void	setFilterNonUsers(boolean filterNonUsers)

Methods inherited from class javax.swing.table.AbstractTableModel

addTableModelListener, findColumn, fireTableCellUpdated, fireTableChanged, fireTableRowsDeleted, fireTableRowsInserted, fireTableRowsUpdated, fireTableStructureChanged, getListeners, getTableModelListeners, isCellEditable, removeTableModelListener, setValueAt

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

INIT_COLUMNS

public static final int INIT_COLUMNS

The number of columns that are always there, before runs are listed.

See Also:

Constant Field Values

Constructor Detail

GeneSetTableModel

public GeneSetTableModel(GeneAnnotations geneData,
                 List<GeneSetPvalRun> results)

Method Detail

getColumnClass

public Class<?> getColumnClass(int columnIndex)

Specified by:

getColumnClass in interface TableModel

Overrides:

getColumnClass in class AbstractTableModel

fireTableDataChanged

public void fireTableDataChanged()

Overrides:

fireTableDataChanged in class AbstractTableModel

setFilterNonUsers

public void setFilterNonUsers(boolean filterNonUsers)

addRun

public void addRun()

setFilterEmpty

public void setFilterEmpty(boolean b)

setFilterEmptyResults

public void setFilterEmptyResults(boolean b)

filter

public void filter()

getColumnCount

public int getColumnCount()

getColumnIndexForRun

public int getColumnIndexForRun(int runIndex)

Parameters:

runIndex - index (from 0) of the run.

Returns:

the index of the column containing the run. -1 if there is no such run.

getColumnName

public String getColumnName(int column)

Specified by:

getColumnName in interface TableModel

Overrides:

getColumnName in class AbstractTableModel

getRowCount

public int getRowCount()

getRunIndex

public int getRunIndex(int columnNumber)

Parameters:

columnNumber -

Returns:

the index of the run in that column. -1 if the column does not contain a run.

getValueAt

public Object getValueAt(int rowIndex,
                int colIndex)

removeRunData

public void removeRunData(int runIndex)

renameRun

public void renameRun(int runIndex,
             String newName)

Parameters:

runIndex -

newName -