Uses of Class
ubic.erminej.analysis.AbstractLongTask

Packages that use AbstractLongTask

Package	Description
ubic.erminej.analysis

Uses of AbstractLongTask in ubic.erminej.analysis

Subclasses of AbstractLongTask in ubic.erminej.analysis

Modifier and Type	Class and Description
class	AbstractGeneSetPvalGenerator Base implementation of pvalue generator
class	AbstractResamplingGeneSetScore
class	CorrelationPvalGenerator
class	ExperimentScoreQuickPvalGenerator Does the same thing as GeneSetResamplingPvalGeneratorbut is stripped-down for using during resampling.
class	GeneSetResamplingBackgroundDistributionGenerator Calculates a background distribution for class scores derived from randomly selected individual gene scores.
class	GeneSetResamplingPvalGenerator Generates gene set p values using the resampling-based 'experiment score' method of Pavlidis et al.
class	MultipleTestCorrector Perform multiple test correction on class scores.
class	OraPvalGenerator Compute gene set scores based on over-representation analysis (ORA).
class	ResamplingCorrelationGeneSetScore
class	RocPvalGenerator Compute gene set p values based on the receiver operating characteristic (ROC).