Class SingleCellExpressionExperimentServiceTest

java.lang.Object
org.springframework.test.context.junit4.AbstractJUnit4SpringContextTests
org.springframework.test.context.junit4.AbstractTransactionalJUnit4SpringContextTests
ubic.gemma.core.util.test.BaseDatabaseTest
ubic.gemma.persistence.service.expression.experiment.SingleCellExpressionExperimentServiceTest
All Implemented Interfaces:
org.springframework.beans.factory.Aware, org.springframework.context.ApplicationContextAware
@ContextConfiguration public class SingleCellExpressionExperimentServiceTest extends BaseDatabaseTest
Tests covering integration of single-cell.

  • Constructor Details

    • SingleCellExpressionExperimentServiceTest

      public SingleCellExpressionExperimentServiceTest()

  • Method Details

    • setUp

      public void setUp()

    • resetMocks

      public void resetMocks()

    • testGetSingleCellDimensionWithoutCellIds

      public void testGetSingleCellDimensionWithoutCellIds()

    • testGetSingleCellDataMatrix

      public void testGetSingleCellDataMatrix()

    • testGetSingleCellDataVectors

      public void testGetSingleCellDataVectors()

    • testAddSingleCellDataVectors

      public void testAddSingleCellDataVectors()

    • testAddSingleCellDataVectorsWithInteger

      public void testAddSingleCellDataVectorsWithInteger()

    • testAddSingleCellDataVectorsTwice

      public void testAddSingleCellDataVectorsTwice()

    • testAddSingleCellDataVectorsWhenThereIsAlreadyAPreferredSetOfVectors

      public void testAddSingleCellDataVectorsWhenThereIsAlreadyAPreferredSetOfVectors()

    • testReplaceVectors

      public void testReplaceVectors()

    • testRemoveVectors

      public void testRemoveVectors()

    • testRemoveVectorsSharingADimension

      public void testRemoveVectorsSharingADimension()

    • testRelabelCellTypes

      public void testRelabelCellTypes()

    • testGetPreferredCellTypeLabellingWhenNonUnique

      public void testGetPreferredCellTypeLabellingWhenNonUnique()
      This a behaviour test when the labelling is not unique. This can be caused by multiple preferred single-cell QTs or multiple preferred cell type labellings.

    • testRecreateCellTypeFactor

      public void testRecreateCellTypeFactor()

    • testGetCellLevelCharacteristics

      public void testGetCellLevelCharacteristics()

    • testAddDuplicatedCellLevelCharacteristics

      public void testAddDuplicatedCellLevelCharacteristics()

    • testUpdateSparsityMetrics

      public void testUpdateSparsityMetrics()