Package ubic.gemma.model.expression.experiment

Class ExperimentalDesign

java.lang.Object
ubic.gemma.model.common.AbstractIdentifiable
ubic.gemma.model.common.AbstractDescribable
ubic.gemma.model.expression.experiment.ExperimentalDesign
All Implemented Interfaces:
gemma.gsec.model.Securable, gemma.gsec.model.SecuredChild, Securable, SecuredChild, Describable, Identifiable
@Indexed public class ExperimentalDesign extends AbstractDescribable implements SecuredChild

  • Constructor Details

    • ExperimentalDesign

      public ExperimentalDesign()

  • Method Details

    • getId

      @DocumentId public Long getId()
      Description copied from interface: Identifiable
      Obtain the identifier of the object.
      Specified by:
      getId in interface Identifiable
      Specified by:
      getId in interface gemma.gsec.model.Securable
      Overrides:
      getId in class AbstractIdentifiable

    • getName

      @Field public String getName()
      Description copied from interface: Describable
      Obtain the name of the object.

      It may be human-readable.

      It is case-insensitive and usually unique within a certain context (e.g. in a collection).

      It is non-null by default, but implementation may override this with a Nullable annotation. If null, it should not be treated as equal to other Describable objects (i.e. there can be multiple null-named describable within a given set).

      Specified by:
      getName in interface Describable
      Overrides:
      getName in class AbstractDescribable

    • getDescription

      @Field(store=YES) public String getDescription()
      Description copied from interface: Describable
      Obtain a human-readable description of the object
      Specified by:
      getDescription in interface Describable
      Overrides:
      getDescription in class AbstractDescribable

    • getExperimentalFactors

      @IndexedEmbedded public Set<ExperimentalFactor> getExperimentalFactors()
      Returns:
      The description of the factors (TimeCourse, Dosage, etc.) that group the BioAssays.

    • setExperimentalFactors

      public void setExperimentalFactors(Set<ExperimentalFactor> experimentalFactors)

    • getNormalizationDescription

      public String getNormalizationDescription()

    • setNormalizationDescription

      public void setNormalizationDescription(String normalizationDescription)

    • getQualityControlDescription

      public String getQualityControlDescription()

    • setQualityControlDescription

      public void setQualityControlDescription(String qualityControlDescription)

    • getReplicateDescription

      public String getReplicateDescription()

    • setReplicateDescription

      public void setReplicateDescription(String replicateDescription)

    • getSecurityOwner

      public Securable getSecurityOwner()
      Specified by:
      getSecurityOwner in interface gemma.gsec.model.SecuredChild
      Specified by:
      getSecurityOwner in interface SecuredChild

    • getTypes

      public Set<Characteristic> getTypes()

    • setTypes

      public void setTypes(Set<Characteristic> types)

    • equals

      public boolean equals(Object object)
      Description copied from class: AbstractDescribable
      Important note: The name should be compared in a case-insensitive manner. You can use DescribableUtils.equalsByName(Describable, Describable) to get the correct behavior.

      Important note: Two objects with the same class and non-null ID must be considered equal. If one or both IDs are nulls, the rest of the state can be used to determine equality.

      Specified by:
      equals in class AbstractDescribable