Package ubic.gemma.apps

Class DifferentialExpressionAnalysisCliTest

java.lang.Object
org.springframework.test.context.junit4.AbstractJUnit4SpringContextTests
ubic.gemma.core.util.test.BaseTest
ubic.gemma.apps.DifferentialExpressionAnalysisCliTest
All Implemented Interfaces:
org.springframework.beans.factory.Aware, org.springframework.context.ApplicationContextAware
@WithMockUser("bob") @DirtiesContext(classMode=AFTER_EACH_TEST_METHOD) @ContextConfiguration @TestExecutionListeners(WithSecurityContextTestExecutionListener.class) public class DifferentialExpressionAnalysisCliTest extends BaseTest

  • Constructor Details

    • DifferentialExpressionAnalysisCliTest

      public DifferentialExpressionAnalysisCliTest()

  • Method Details

    • setUp

      public void setUp() throws IOException
      Throws:
      IOException

    • testAnalysisWithAutomaticallySelectedFactors

      public void testAnalysisWithAutomaticallySelectedFactors() throws IOException
      Throws:
      IOException

    • testAnalysisWithAutomaticallySelectedFactorsWhenBatchFactorIsPresent

      public void testAnalysisWithAutomaticallySelectedFactorsWhenBatchFactorIsPresent() throws IOException
      Throws:
      IOException

    • testAnalysisWithAutomaticallySelectedFactorsWithBatchFactorIsPresentAndIncluded

      public void testAnalysisWithAutomaticallySelectedFactorsWithBatchFactorIsPresentAndIncluded() throws IOException
      Throws:
      IOException

    • testSubSetAnalysisWithAutomaticallySelectedFactorsWhenContinuousFactorIsPresent

      public void testSubSetAnalysisWithAutomaticallySelectedFactorsWhenContinuousFactorIsPresent()

    • testSubSetAnalysisWithAutomaticallySelectedFactorsAndContinuousFactor

      public void testSubSetAnalysisWithAutomaticallySelectedFactorsAndContinuousFactor()

    • testAnalysisWithManuallySelectedFactors

      public void testAnalysisWithManuallySelectedFactors()

    • testAnalysisWithManuallySelectedFactorsWhenFactorsAreRepeated

      public void testAnalysisWithManuallySelectedFactorsWhenFactorsAreRepeated()

    • testAnalysisWithManuallySelectedFactorsWithNoInteraction

      public void testAnalysisWithManuallySelectedFactorsWithNoInteraction()

    • testAnalysisWithManuallySelectedFactorsWithInteractionOfContinuousFactor

      public void testAnalysisWithManuallySelectedFactorsWithInteractionOfContinuousFactor()

    • testAnalysisWithManuallySelectedFactorsWhenFactorDoesNotExist

      public void testAnalysisWithManuallySelectedFactorsWhenFactorDoesNotExist()

    • testAnalysisWithManuallySelectedInteraction

      public void testAnalysisWithManuallySelectedInteraction()

    • testAnalysisWithManuallySelectedInteractionWhenInteractionIsRepeated

      public void testAnalysisWithManuallySelectedInteractionWhenInteractionIsRepeated()

    • testAnalysisWithManuallySelectedInteractionOfContinuousFactor

      public void testAnalysisWithManuallySelectedInteractionOfContinuousFactor()

    • testSubSetAnalysisWithManuallySelectedFactors

      public void testSubSetAnalysisWithManuallySelectedFactors()

    • testSubSetAnalysisWithManuallySelectedFactorsAndContinuousFactor

      public void testSubSetAnalysisWithManuallySelectedFactorsAndContinuousFactor()

    • testSubSetAnalysisWithManuallySelectedFactorsWhenSubSetFactorIsSelected

      public void testSubSetAnalysisWithManuallySelectedFactorsWhenSubSetFactorIsSelected()

    • testSubSetAnalysisWithManuallySelectedFactorsAndNoInteraction

      public void testSubSetAnalysisWithManuallySelectedFactorsAndNoInteraction()

    • testRedoAnalysis

      public void testRedoAnalysis()

    • testDeleteAnalysis

      public void testDeleteAnalysis()

    • testCompleteSubSetFactors

      public void testCompleteSubSetFactors()

    • testCompleteFactors

      public void testCompleteFactors()