Package ubic.gemma.model.genome.sequenceAnalysis

Class BlatAssociation

java.lang.Object

ubic.gemma.model.common.AbstractIdentifiable

ubic.gemma.model.association.BioSequence2GeneProduct

ubic.gemma.model.genome.sequenceAnalysis.BlatAssociation

All Implemented Interfaces:

Identifiable

public class BlatAssociation
extends BioSequence2GeneProduct

Nested Class Summary

Nested Classes

Modifier and Type	Class	Description
static final class	BlatAssociation.Factory

Constructor Summary

Constructors

Constructor	Description
BlatAssociation()

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object object)	Important note: Two objects with the same class and non-null ID must be considered equal.
BlatResult	getBlatResult()
int	hashCode()	Important note: Never use the ID in the hashCode() implementation since it can be assigned when the object is persisted.
void	setBlatResult(BlatResult blatResult)
String	toString()

Methods inherited from class ubic.gemma.model.association.BioSequence2GeneProduct

getBioSequence, getGeneProduct, getOverlap, getScore, getSourceAnalysis, getSpecificity, getThreePrimeDistance, getThreePrimeDistanceMeasurementMethod, setBioSequence, setGeneProduct, setOverlap, setScore, setSourceAnalysis, setSpecificity, setThreePrimeDistance, setThreePrimeDistanceMeasurementMethod

Methods inherited from class ubic.gemma.model.common.AbstractIdentifiable

getId, setId

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Constructor Details

BlatAssociation

public BlatAssociation()

Method Details

getBlatResult

public BlatResult getBlatResult()

setBlatResult

public void setBlatResult(BlatResult blatResult)

hashCode

public int hashCode()

Description copied from class: AbstractIdentifiable

Important note: Never use the ID in the hashCode() implementation since it can be assigned when the object is persisted.

Specified by:

hashCode in class AbstractIdentifiable

equals

public boolean equals(Object object)

Description copied from class: AbstractIdentifiable

Important note: Two objects with the same class and non-null ID must be considered equal. If one or both IDs are nulls, the rest of the state can be used to determine equality.

Specified by:

equals in class AbstractIdentifiable

toString

public String toString()

Overrides:

toString in class AbstractIdentifiable