Package ubic.gemma.persistence.service.genome.gene

Interface GeneProductDao

All Superinterfaces:

BaseDao<GeneProduct>, BaseVoEnabledDao<GeneProduct,GeneProductValueObject>

All Known Implementing Classes:

GeneProductDaoImpl

public interface GeneProductDao
extends BaseVoEnabledDao<GeneProduct,GeneProductValueObject>

See Also:

• GeneProduct

Method Summary

Modifier and Type	Method	Description
Collection<GeneProduct>	findByName(String name, Taxon taxon)
GeneProduct	findByNcbiId(String ncbiGi)
Collection<Gene>	getGenesByName(String search)
Collection<Gene>	getGenesByNcbiId(String search)
GeneProduct	thaw(GeneProduct existing)

Methods inherited from interface ubic.gemma.persistence.service.BaseDao

countAll, create, create, find, findOrCreate, getElementClass, load, load, loadAll, loadReference, loadReference, reload, reload, remove, remove, remove, save, save, streamAll, streamAll, update, update

Methods inherited from interface ubic.gemma.persistence.service.BaseVoEnabledDao

loadAllValueObjects, loadValueObject, loadValueObjectById, loadValueObjects, loadValueObjectsByIds

Method Details

findByNcbiId

GeneProduct findByNcbiId(String ncbiGi)

getGenesByName

Collection<Gene> getGenesByName(String search)

getGenesByNcbiId

Collection<Gene> getGenesByNcbiId(String search)

findByName

Collection<GeneProduct> findByName(String name,
 Taxon taxon)

thaw

GeneProduct thaw(GeneProduct existing)