Package ubic.gemma.model.genome.gene

Class GOGroupValueObject

java.lang.Object

ubic.gemma.model.common.IdentifiableValueObject<GeneSet>

ubic.gemma.model.genome.gene.GeneSetValueObject

ubic.gemma.model.genome.gene.SessionBoundGeneSetValueObject

ubic.gemma.model.genome.gene.GOGroupValueObject

All Implemented Interfaces:

gemma.gsec.model.Securable, gemma.gsec.model.SecureValueObject, Serializable, GemmaSessionBackedValueObject, Identifiable

public class GOGroupValueObject
extends SessionBoundGeneSetValueObject

Author:

tvrossum

See Also:

• Serialized Form

Field Summary

Fields inherited from class ubic.gemma.model.common.IdentifiableValueObject

id

Constructor Summary

Constructors

Constructor	Description
GOGroupValueObject()
GOGroupValueObject(String name, String description, Long taxonId, String taxonName, Collection<Long> memberIds, String goId, String searchTerm)	Method to create a display object from scratch

Method Summary

Modifier and Type	Method	Description
boolean	equals(Object obj)
String	getGoId()
String	getSearchTerm()
int	hashCode()
void	setGoId(String goId)
void	setSearchTerm(String searchTerm)

Methods inherited from class ubic.gemma.model.genome.gene.SessionBoundGeneSetValueObject

isModified, setModified

Methods inherited from class ubic.gemma.model.genome.gene.GeneSetValueObject

canEqual, getCurrentUserIsOwner, getDescription, getGeneIds, getIsPublic, getIsShared, getName, getSecurableClass, getSize, getTaxon, getTaxonId, getTaxonName, getUserCanWrite, getUserOwned, setDescription, setGeneIds, setIsPublic, setIsShared, setName, setSize, setTaxon, setUserCanWrite, setUserOwned, toString

Methods inherited from class ubic.gemma.model.common.IdentifiableValueObject

getId, setId

Methods inherited from class java.lang.Object

clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface ubic.gemma.model.common.GemmaSessionBackedValueObject

getId, setId

Methods inherited from interface gemma.gsec.model.Securable

getId

Constructor Details

GOGroupValueObject

public GOGroupValueObject()

GOGroupValueObject

public GOGroupValueObject(String name,
 String description,
 Long taxonId,
 String taxonName,
 Collection<Long> memberIds,
 String goId,
 String searchTerm)

Method to create a display object from scratch

Parameters:

name - cannot be null

description - should not be null

taxonId - can be null

taxonName - can be null

memberIds - can be null; for a gene or experiment, this is a collection just containing their id

goId - go ID

searchTerm - search term

Method Details

hashCode

public int hashCode()

Overrides:

hashCode in class GeneSetValueObject

equals

public boolean equals(Object obj)

Overrides:

equals in class GeneSetValueObject

getGoId

public String getGoId()

Returns:

the goId

setGoId

public void setGoId(String goId)

Parameters:

goId - the goId to set

getSearchTerm

public String getSearchTerm()

Returns:

the searchTerm

setSearchTerm

public void setSearchTerm(String searchTerm)

Parameters:

searchTerm - the searchTerm to set