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Interfaces Interface Description ubic.gemma.persistence.service.common.auditAndSecurity.PersonDao as Person is deprecated
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Classes Class Description ubic.gemma.core.config.PropertySourcesConfiguration This has been replaced with Spring-based configurationSettingsConfig
and usage ofValue
to inject configurations. You can use@Value("${property}")
as replacement.ubic.gemma.core.config.Settings This has been replaced with Spring-based configurationSettingsConfig
and usage ofValue
to inject configurations. You can use@Value("${property}")
as replacement.ubic.gemma.core.loader.expression.arrayDesign.ArrayDesignParser ubic.gemma.model.common.auditAndSecurity.eventType.AutomatedAnnotationEvent this event type was used by the auto-tagger, which has been removed. This event type has been kept so that the audit-trails can still properly display these events, but creation new events of this type should not occur.ubic.gemma.model.common.auditAndSecurity.eventType.FailedBatchInformationMissingEvent ubic.gemma.model.common.auditAndSecurity.Person not neededubic.gemma.model.expression.experiment.FactorValueValueObject aim towards using theFactorValueBasicValueObject
. This one is confusing. Once usage of this type has been completely phased out, revise the BioMaterialValueObject and relevant DAOs and Services.ubic.gemma.persistence.service.common.auditAndSecurity.PersonDaoImpl as Person is deprecatedubic.gemma.persistence.service.expression.experiment.FactorValueMigratorServiceImpl
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Enum Constants Enum Constant Description ubic.gemma.model.common.quantitationtype.ScaleType.FOLDCHANGE