@ParametersAreNonnullByDefault

Package ubic.gemma.persistence.util

Interface Summary

Interface	Description
PropertyMapping	Represents a mapping between a query/criteria property and some original property space.

Class Summary

Class	Description
AclCriteriaUtils	Utilities for integrating ACLs with Hibernate Criteria API.
AclQueryUtils	Utilities for integrating ACL into Query.
BusinessKey	Methods to test business-key-related issues on objects.
ByteArrayUtils	Utilities for working with byte arrays.
ChannelUtils	Determine if a quantitation type (by name) represents background or signal.
CommonQueries	Contains methods to perform 'common' queries that are needed across DAOs.
DescribableComparator
DifferentialExpressionAnalysisResultComparator
DifferentialExpressionAnalysisResultComparator.Factory
EE2CAclQueryUtils	This class provides a fast-path to AclQueryUtils that uses the denormalized mask for anonymous users.
EntityUrlBuilder	This builder allows for generating URLs for entities in Gemma Web and REST.
FactorValueComparator
FactorValueVector
Filter	Holds the necessary information to filter an entity with a property, operator and right-hand side value.
FilterCriteriaUtils	Utilities for integrating Filter with Hibernate Criteria API.
FilterQueryUtils	Utilities for integrating Filter into Query.
Filters	Represents a conjunction of disjunctions of Filter.
FiltersUtils	Utilities for working with Filters and Filter.
IdentifiableUtils	Utilities for Identifiable.
MessagesConfig
Pointcuts	General-purpose pointcuts to recognize CRUD operations etc.
PropertyMappingUtils	Utilities for dealing with PropertyMapping.
QueryUtils	Utilities for Query.
SecurityUtils
ServiceBasedEntityConverter<O extends Identifiable>	Performs conversion by identifier and collection of identifier for a BaseReadOnlyService.
ServiceBasedValueObjectConverter<O extends Identifiable,VO extends IdentifiableValueObject<O>>	Perform conversion to value object by entity, ID and collections of entities and IDs and also to entity by ID and collection of IDs.
Slice<O>	Represents a slice of List.
Sort	Represents a directed sort by a property.
Subquery	Represents a subquery right-hand side of a Filter.
Subquery.Alias
SubqueryUtils
Thaws	Consistent initialization logic for the entity graph.
ValueObjectConfig

Enum Summary

Enum	Description
Filter.Operator
Sort.Direction	Direction of the sort.
Sort.NullMode
SubqueryMode	Mode to use when filtering with a subquery.