Package ubic.gemma.persistence.service.analysis.expression.coexpression

Interface CoexpressionAnalysisDao

All Superinterfaces:

AnalysisDao<CoexpressionAnalysis>, BaseDao<CoexpressionAnalysis>, SingleExperimentAnalysisDao<CoexpressionAnalysis>

All Known Implementing Classes:

CoexpressionAnalysisDaoImpl

public interface CoexpressionAnalysisDao
extends SingleExperimentAnalysisDao<CoexpressionAnalysis>

See Also:

CoexpressionAnalysis

Method Summary

Modifier and Type	Method	Description
CoexpCorrelationDistribution	getCoexpCorrelationDistribution(ExpressionExperiment expressionExperiment)
Collection<Long>	getExperimentsWithAnalysis(Collection<Long> idsToFilter)
boolean	hasCoexpCorrelationDistribution(ExpressionExperiment ee)

Methods inherited from interface ubic.gemma.persistence.service.analysis.AnalysisDao

existsByExperiment, findByName, findByTaxon

Methods inherited from interface ubic.gemma.persistence.service.BaseDao

countAll, create, create, find, findOrCreate, getElementClass, getIdentifierPropertyName, load, load, loadAll, loadReference, loadReference, reload, reload, remove, remove, remove, save, save, streamAll, streamAll, update, update

Methods inherited from interface ubic.gemma.persistence.service.analysis.SingleExperimentAnalysisDao

findByExperiment, findByExperiments

Method Detail

getCoexpCorrelationDistribution

CoexpCorrelationDistribution getCoexpCorrelationDistribution(ExpressionExperiment expressionExperiment)

getExperimentsWithAnalysis

Collection<Long> getExperimentsWithAnalysis(Collection<Long> idsToFilter)

hasCoexpCorrelationDistribution

boolean hasCoexpCorrelationDistribution(ExpressionExperiment ee)