Package ubic.gemma.core.loader.expression.singleCell

Interface SingleCellDataLoaderConfigurer<T extends SingleCellDataLoader>

Type Parameters:

T - the type of loader this configurer produces

All Superinterfaces:

DataLoaderConfigurer<T,SingleCellDataLoaderConfig>

All Known Implementing Classes:

AbstractAnnDataSingleCellDataLoaderConfigurer, AbstractMexSingleCellDataLoaderConfigurer, AnnDataSingleCellDataLoaderConfigurer, GenericMetadataSingleCellDataLoaderConfigurer, MexSingleCellDataLoaderConfigurer, NullSingleCellDataLoaderConfigurer, SequencingMetadataFileSingleCellDataLoaderConfigurer

public interface SingleCellDataLoaderConfigurer<T extends SingleCellDataLoader>
extends DataLoaderConfigurer<T,SingleCellDataLoaderConfig>

Interface for configuring a single-cell data loader.

The role of a configurer is to apply a SingleCellDataLoaderConfig to a SingleCellDataLoader.

This exists because we need to configure the loader in two different scenarios:

• When we have a GeoSeries and we need to inspect the data prior to loading the dataset
• When we have an existing ExpressionExperiment and we need to load single-cell data.

Author:

poirigui

Method Summary

Methods inherited from interface ubic.gemma.core.loader.expression.DataLoaderConfigurer

configureLoader