Package ubic.gemma.core.loader.entrez.pubmed

Class PubMedXMLFetcher

java.lang.Object

ubic.gemma.core.loader.entrez.pubmed.PubMedXMLFetcher

public class PubMedXMLFetcher
extends Object

Class that can retrieve pubmed records (in XML format) via HTTP. The url used is configured via a resource.

Author:

pavlidis

Constructor Summary

Constructors

Constructor	Description
PubMedXMLFetcher()

Method Summary

Modifier and Type	Method	Description
BibliographicReference	retrieveByHTTP(int pubMedId)
Collection<BibliographicReference>	retrieveByHTTP(Collection<Integer> pubMedIds)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

PubMedXMLFetcher

public PubMedXMLFetcher()

Method Detail

retrieveByHTTP

public Collection<BibliographicReference> retrieveByHTTP(Collection<Integer> pubMedIds)
                                                  throws IOException

Throws:

IOException

retrieveByHTTP

public BibliographicReference retrieveByHTTP(int pubMedId)
                                      throws IOException

Throws:

IOException