DataUpdaterTest (Gemma 1.31.5-SNAPSHOT Test API)

java.lang.Object
- org.springframework.test.context.junit4.AbstractJUnit4SpringContextTests
- - ubic.gemma.core.util.test.BaseSpringContextTest
  - - ubic.gemma.core.loader.expression.geo.AbstractGeoServiceTest
    - - ubic.gemma.core.loader.expression.DataUpdaterTest

All Implemented Interfaces:

Aware, InitializingBean, ApplicationContextAware
```
public class DataUpdaterTest
extends AbstractGeoServiceTest
```
Author:

paul

Field Summary
- Fields inherited from class ubic.gemma.core.util.test.BaseSpringContextTest
  externalDatabaseService, jdbcTemplate, log, persisterHelper, rule, taxonService, testHelper
- Fields inherited from class org.springframework.test.context.junit4.AbstractJUnit4SpringContextTests
  applicationContext, logger

Constructor Summary

Constructors
Constructor Description

DataUpdaterTest()

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`void`	`tearDown()`
`void`	`testAddData()`
`void`	`testLoadRNASeqData()`
`void`	`testLoadRNASeqDataWithMissingSamples()`

Methods inherited from class ubic.gemma.core.loader.expression.geo.AbstractGeoServiceTest
getTestFileBasePath, getTestFileBasePath

Methods inherited from class ubic.gemma.core.util.test.BaseSpringContextTest
addTestAnalyses, afterPropertiesSet, countRowsInTable, deleteFromTables, executeSqlScript, getNewTestPersistentCompleteExpressionExperiment, getTaxon, getTestNonPersistentBioSequence, getTestPersistentArrayDesign, getTestPersistentArrayDesign, getTestPersistentArrayDesign, getTestPersistentBasicExpressionExperiment, getTestPersistentBasicExpressionExperiment, getTestPersistentBibliographicReference, getTestPersistentBioAssay, getTestPersistentBioAssay, getTestPersistentBioMaterial, getTestPersistentBioMaterial, getTestPersistentBioSequence, getTestPersistentBioSequence, getTestPersistentBioSequence2GeneProducts, getTestPersistentBlatResult, getTestPersistentBlatResult, getTestPersistentCompleteExpressionExperiment, getTestPersistentCompleteExpressionExperimentWithSequences, getTestPersistentCompleteExpressionExperimentWithSequences, getTestPersistentContact, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentExpressionExperiment, getTestPersistentExpressionExperiment, getTestPersistentGene, getTestPersistentGene, getTestPersistentGeneProduct, getTestPersistentQuantitationType, randomName, resetTestCollectionSize, runAsAdmin, runAsAgent, runAsAnonymous, runAsUser, runAsUser, setTestCollectionSize, setUpAuthentication, setUpSecurityContextHolderStrategy, tearDownSecurityContext

Methods inherited from class org.springframework.test.context.junit4.AbstractJUnit4SpringContextTests
setApplicationContext

Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail
- DataUpdaterTest
```
public DataUpdaterTest()
```

Method Detail

tearDown
```
public void tearDown()
```

testAddData

public void testAddData()
                 throws Exception

Throws:: Exception

testLoadRNASeqData

public void testLoadRNASeqData()
                        throws Exception

Throws:: Exception

testLoadRNASeqDataWithMissingSamples

public void testLoadRNASeqDataWithMissingSamples()
                                          throws Exception

Throws:: Exception