Package ubic.gemma.core.analysis.expression.diff

Class DifferentialExpressionAnalyzerTest

java.lang.Object

org.springframework.test.context.junit4.AbstractJUnit4SpringContextTests

ubic.gemma.core.util.test.BaseSpringContextTest

ubic.gemma.core.analysis.expression.diff.BaseAnalyzerConfigurationTest

ubic.gemma.core.analysis.expression.diff.DifferentialExpressionAnalyzerTest

All Implemented Interfaces:

Aware, InitializingBean, ApplicationContextAware

public class DifferentialExpressionAnalyzerTest
extends BaseAnalyzerConfigurationTest

Author:

keshav

Field Summary

Fields inherited from class ubic.gemma.core.analysis.expression.diff.BaseAnalyzerConfigurationTest

expressionDataMatrixService, processedExpressionDataVectorService

Fields inherited from class ubic.gemma.core.util.test.BaseSpringContextTest

externalDatabaseService, jdbcTemplate, log, persisterHelper, rule, taxonService, testHelper

Fields inherited from class org.springframework.test.context.junit4.AbstractJUnit4SpringContextTests

applicationContext, logger

Constructor Summary

Constructors

Constructor	Description
DifferentialExpressionAnalyzerTest()

Method Summary

Modifier and Type	Method	Description
void	testDetermineAnalysisA()
void	testDetermineAnalysisB()

Methods inherited from class ubic.gemma.core.analysis.expression.diff.BaseAnalyzerConfigurationTest

setUp, tearDown

Methods inherited from class ubic.gemma.core.util.test.BaseSpringContextTest

addTestAnalyses, afterPropertiesSet, countRowsInTable, deleteFromTables, executeSqlScript, getNewTestPersistentCompleteExpressionExperiment, getTaxon, getTestNonPersistentBioSequence, getTestPersistentArrayDesign, getTestPersistentArrayDesign, getTestPersistentArrayDesign, getTestPersistentBasicExpressionExperiment, getTestPersistentBasicExpressionExperiment, getTestPersistentBibliographicReference, getTestPersistentBioAssay, getTestPersistentBioAssay, getTestPersistentBioMaterial, getTestPersistentBioMaterial, getTestPersistentBioSequence, getTestPersistentBioSequence, getTestPersistentBioSequence2GeneProducts, getTestPersistentBlatResult, getTestPersistentBlatResult, getTestPersistentCompleteExpressionExperiment, getTestPersistentCompleteExpressionExperimentWithSequences, getTestPersistentCompleteExpressionExperimentWithSequences, getTestPersistentContact, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentDatabaseEntry, getTestPersistentExpressionExperiment, getTestPersistentExpressionExperiment, getTestPersistentGene, getTestPersistentGene, getTestPersistentGeneProduct, getTestPersistentQuantitationType, randomName, resetTestCollectionSize, runAsAdmin, runAsAgent, runAsAnonymous, runAsUser, runAsUser, setTestCollectionSize, setUpAuthentication, setUpSecurityContextHolderStrategy, tearDownSecurityContext

Methods inherited from class org.springframework.test.context.junit4.AbstractJUnit4SpringContextTests

setApplicationContext

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

DifferentialExpressionAnalyzerTest

public DifferentialExpressionAnalyzerTest()

Method Detail

testDetermineAnalysisA

public void testDetermineAnalysisA()

testDetermineAnalysisB

public void testDetermineAnalysisB()
                            throws Exception

Throws:

Exception