Package ubic.gemma.persistence.service.expression.experiment

Class BioAssaySetServiceImpl

java.lang.Object

ubic.gemma.persistence.service.expression.experiment.BioAssaySetServiceImpl

All Implemented Interfaces:

BaseReadOnlyService<BioAssaySet>, BioAssaySetService

@Service
public class BioAssaySetServiceImpl
extends Object
implements BioAssaySetService

Constructor Summary

Constructors

Constructor	Description
BioAssaySetServiceImpl()

Method Summary

Modifier and Type	Method	Description
long	countAll()
BioAssaySet	find(BioAssaySet entity)	Does a search for the entity in the persistent storage
BioAssaySet	findOrFail(BioAssaySet entity)	Does a search for the entity in the persistent storage, raising a NullPointerException if not found.
Class<? extends BioAssaySet>	getElementClass()
BioAssaySet	load(Long id)	Loads object with given ID.
Collection<BioAssaySet>	load(Collection<Long> ids)	Loads objects with given ids.
Collection<BioAssaySet>	loadAll()	Loads all the entities of specific type.
BioAssaySet	loadOrFail(Long id)	Convenience for running BaseReadOnlyService.load(Long) and checking if the result is null.
<T extends Exception> BioAssaySet	loadOrFail(Long id, Function<String,T> exceptionSupplier)	Load an entity or fail with the supplied exception; the message is generated automatically.
<T extends Exception> BioAssaySet	loadOrFail(Long id, Function<String,T> exceptionSupplier, String message)	Load an entity or fail with the supplied exception and message.
<T extends Exception> BioAssaySet	loadOrFail(Long id, Supplier<T> exceptionSupplier)	Load an entity or fail with the supplied exception.
void	remove(Collection<? extends BioAssaySet> entities)
void	remove(BioAssaySet entity)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BioAssaySetServiceImpl

public BioAssaySetServiceImpl()

Method Detail

getElementClass

public Class<? extends BioAssaySet> getElementClass()

Specified by:

getElementClass in interface BaseReadOnlyService<BioAssaySet>

find

@Nullable
@Transactional(readOnly=true)
public BioAssaySet find(BioAssaySet entity)

Description copied from interface: BaseReadOnlyService

Does a search for the entity in the persistent storage

Specified by:

find in interface BaseReadOnlyService<BioAssaySet>

Parameters:

entity - the entity to be searched for

Returns:

the version of entity retrieved from the persistent storage, if found, otherwise null.

findOrFail

@Nonnull
@Transactional(readOnly=true)
public BioAssaySet findOrFail(BioAssaySet entity)

Description copied from interface: BaseReadOnlyService

Does a search for the entity in the persistent storage, raising a NullPointerException if not found.

Specified by:

findOrFail in interface BaseReadOnlyService<BioAssaySet>

Parameters:

entity - the entity to be searched for

Returns:

the version of entity retrieved from persistent storage

load

public Collection<BioAssaySet> load(Collection<Long> ids)

Description copied from interface: BaseReadOnlyService

Loads objects with given ids.

Specified by:

load in interface BaseReadOnlyService<BioAssaySet>

Parameters:

ids - the ids of objects to be loaded.

Returns:

collection containing object with given IDs.

load

@Nullable
public BioAssaySet load(Long id)

Description copied from interface: BaseReadOnlyService

Loads object with given ID.

Specified by:

load in interface BaseReadOnlyService<BioAssaySet>

Parameters:

id - the ID of entity to be loaded.

Returns:

the entity with matching ID, or null if the entity does not exist or if the passed ID was null

loadOrFail

@Nonnull
public BioAssaySet loadOrFail(Long id)
                       throws NullPointerException

Description copied from interface: BaseReadOnlyService

Convenience for running BaseReadOnlyService.load(Long) and checking if the result is null.

Specified by:

loadOrFail in interface BaseReadOnlyService<BioAssaySet>

Parameters:

id - the ID used to retrieve the entity

Returns:

the entity as per BaseReadOnlyService.load(Long), never null

Throws:

NullPointerException - if the entity does not exist in the persistent storage

loadOrFail

@Nonnull
public <T extends Exception> BioAssaySet loadOrFail(Long id,
                                                    Supplier<T> exceptionSupplier)
                                             throws T extends Exception

Description copied from interface: BaseReadOnlyService

Load an entity or fail with the supplied exception.

Specified by:

loadOrFail in interface BaseReadOnlyService<BioAssaySet>

Throws:

T - if the entity does not exist in the persistent storage

T extends Exception

loadOrFail

@Nonnull
public <T extends Exception> BioAssaySet loadOrFail(Long id,
                                                    Function<String,T> exceptionSupplier)
                                             throws T extends Exception

Description copied from interface: BaseReadOnlyService

Load an entity or fail with the supplied exception; the message is generated automatically.

Specified by:

loadOrFail in interface BaseReadOnlyService<BioAssaySet>

Throws:

T - if the entity does not exist in the persistent storage

T extends Exception

loadOrFail

@Nonnull
public <T extends Exception> BioAssaySet loadOrFail(Long id,
                                                    Function<String,T> exceptionSupplier,
                                                    String message)
                                             throws T extends Exception

Description copied from interface: BaseReadOnlyService

Load an entity or fail with the supplied exception and message.

Specified by:

loadOrFail in interface BaseReadOnlyService<BioAssaySet>

Throws:

T - if the entity does not exist in the persistent storage

T extends Exception

loadAll

@Transactional(readOnly=true)
public Collection<BioAssaySet> loadAll()

Description copied from interface: BaseReadOnlyService

Loads all the entities of specific type.

Specified by:

loadAll in interface BaseReadOnlyService<BioAssaySet>

Returns:

collection of all entities currently available in the persistent storage.

countAll

@Transactional(readOnly=true)
public long countAll()

Specified by:

countAll in interface BaseReadOnlyService<BioAssaySet>

remove

@Transactional
public void remove(Collection<? extends BioAssaySet> entities)

Specified by:

remove in interface BioAssaySetService

remove

@Transactional
public void remove(BioAssaySet entity)

Specified by:

remove in interface BioAssaySetService