Package ubic.gemma.web.controller.expression.experiment

Class ExpressionExperimentQCUtils

java.lang.Object

ubic.gemma.web.controller.expression.experiment.ExpressionExperimentQCUtils

public class ExpressionExperimentQCUtils
extends Object

Helper functions for checking existence etc. of QC information.

Author:

paul

Constructor Summary

Constructors

Constructor	Description
ExpressionExperimentQCUtils()

Method Summary

Modifier and Type	Method	Description
static boolean	hasNodeDegreeDistFile(ubic.gemma.model.expression.experiment.ExpressionExperiment ee)
static boolean	hasPvalueDistFiles(ubic.gemma.model.expression.experiment.ExpressionExperiment ee)
static int	numFactors(ubic.gemma.model.expression.experiment.ExpressionExperiment expressionExperiment)

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ExpressionExperimentQCUtils

public ExpressionExperimentQCUtils()

Method Detail

hasNodeDegreeDistFile

public static boolean hasNodeDegreeDistFile(ubic.gemma.model.expression.experiment.ExpressionExperiment ee)

hasPvalueDistFiles

public static boolean hasPvalueDistFiles(ubic.gemma.model.expression.experiment.ExpressionExperiment ee)

numFactors

public static int numFactors(ubic.gemma.model.expression.experiment.ExpressionExperiment expressionExperiment)

Parameters:

expressionExperiment - ee

Returns:

How many factors (including batches) will be displayed in the PCA results?