Package ubic.gemma.web.controller.expression.experiment

Class ExpressionExperimentEditValueObject

  • All Implemented Interfaces:
    gemma.gsec.model.Securable, gemma.gsec.model.SecureValueObject, Serializable, ubic.gemma.model.common.Identifiable
    public class ExpressionExperimentEditValueObject
extends ubic.gemma.model.expression.experiment.ExpressionExperimentDetailsValueObject
    Author:
    paul
    See Also:
    Serialized Form

    • Field Summary

      • Fields inherited from class ubic.gemma.model.expression.experiment.ExpressionExperimentValueObject

        description, name, numberOfBioAssays

      • Fields inherited from class ubic.gemma.model.IdentifiableValueObject

        id

    • Method Summary

      All Methods Instance Methods Concrete Methods 
      Modifier and Type Method Description
      Collection<ubic.gemma.model.expression.bioAssay.BioAssayValueObject> getBioAssays()  
      Collection<ubic.gemma.model.common.quantitationtype.QuantitationTypeValueObject> getQuantitationTypes()  
      void setBioAssays​(Collection<ubic.gemma.model.expression.bioAssay.BioAssayValueObject> bioAssays)  
      void setQuantitationTypes​(Collection<ubic.gemma.model.common.quantitationtype.QuantitationTypeValueObject> qts)  

      • Methods inherited from class ubic.gemma.model.expression.experiment.ExpressionExperimentDetailsValueObject

        auditEvents2SampleRemovedFlags, getActuallyTroubled, getArrayDesigns, getBatchFetchEventType, getDateArrayDesignLastUpdated, getDateBatchFetch, getDateCached, getDateDifferentialAnalysis, getDateLinkAnalysis, getDateMissingValueAnalysis, getDatePcaAnalysis, getDateProcessedDataVectorComputation, getDescription, getDifferentialExpressionAnalyses, getExpressionExperimentSets, getHasBothIntensities, getHasCoexpressionAnalysis, getHasDifferentialExpressionAnalysis, getHasEitherIntensity, getHasMultiplePreferredQuantitationTypes, getHasMultipleTechnologyTypes, getIsRNASeq, getLastArrayDesignUpdateDate, getLinkAnalysisEventType, getMinPvalue, getMissingValueAnalysisEventType, getNumAnnotations, getNumPopulatedFactors, getOriginalPlatforms, getOtherParts, getPcaAnalysisEventType, getPlatformTroubled, getPrimaryCitation, getProcessedDataVectorComputationEventType, getPubmedId, getQChtml, getReprocessedFromRawData, getSampleRemovedFlags, getSecondaryAccession, getSecondaryExternalDatabase, getSecondaryExternalUri, getTroubled, getTroubleDetails, getTroubleDetails, isHasBatchInformation, setArrayDesigns, setBatchFetchEventType, setDateArrayDesignLastUpdated, setDateBatchFetch, setDateCached, setDateDifferentialAnalysis, setDateLinkAnalysis, setDateMissingValueAnalysis, setDatePcaAnalysis, setDateProcessedDataVectorComputation, setDescription, setDifferentialExpressionAnalyses, setExpressionExperimentSets, setHasBatchInformation, setHasBothIntensities, setHasCoexpressionAnalysis, setHasDifferentialExpressionAnalysis, setHasEitherIntensity, setHasMultiplePreferredQuantitationTypes, setHasMultipleTechnologyTypes, setIsRNASeq, setLastArrayDesignUpdateDate, setLinkAnalysisEventType, setMinPvalue, setMissingValueAnalysisEventType, setNumAnnotations, setNumPopulatedFactors, setOriginalPlatforms, setOtherParts, setPcaAnalysisEventType, setPrimaryCitation, setProcessedDataVectorComputationEventType, setPubmedId, setQChtml, setReprocessedFromRawData, setSampleRemovedFlags, setSecondaryAccession, setSecondaryExternalDatabase, setSecondaryExternalUri

      • Methods inherited from class ubic.gemma.model.expression.experiment.ExpressionExperimentValueObject

        getAccession, getArrayDesignCount, getBatchConfound, getBatchEffect, getBatchEffectStatistics, getBioAssayCount, getBioMaterialCount, getCurrentUserHasWritePermission, getCurrentUserIsOwner, getExperimentalDesign, getExternalDatabase, getExternalUri, getGeeq, getIsPublic, getIsShared, getMetadata, getName, getNumberOfBioAssays, getProcessedExpressionVectorCount, getSecurableClass, getShortName, getSource, getSuitableForDEA, getTaxon, getTaxonId, getTaxonObject, getTechnologyType, getUserCanWrite, getUserOwned, setAccession, setArrayDesignCount, setBatchConfound, setBatchEffect, setBatchEffectStatistics, setBioMaterialCount, setCurrentUserHasWritePermission, setCurrentUserIsOwner, setExperimentalDesign, setExternalDatabase, setExternalUri, setGeeq, setIsPublic, setIsShared, setMetadata, setName, setNumberOfBioAssays, setProcessedExpressionVectorCount, setShortName, setSource, setSuitableForDEA, setTaxonObject, setTechnologyType, setUserCanWrite, setUserOwned, toString

      • Methods inherited from class ubic.gemma.model.common.auditAndSecurity.curation.AbstractCuratableValueObject

        getCurationNote, getLastNeedsAttentionEvent, getLastNoteUpdateEvent, getLastTroubledEvent, getLastUpdated, getNeedsAttention, setCurationNote, setLastNeedsAttentionEvent, setLastNoteUpdateEvent, setLastTroubledEvent, setLastUpdated, setNeedsAttention, setTroubled

      • Methods inherited from class ubic.gemma.model.IdentifiableValueObject

        canEqual, equals, getId, hashCode, setId

      • Methods inherited from interface gemma.gsec.model.Securable

        getId

    • Constructor Detail

      • ExpressionExperimentEditValueObject

        public ExpressionExperimentEditValueObject()
        Required when using the class as a spring bean.

      • ExpressionExperimentEditValueObject

        public ExpressionExperimentEditValueObject​(ubic.gemma.model.expression.experiment.ExpressionExperimentValueObject eevo)

    • Method Detail

      • getQuantitationTypes

        public Collection<ubic.gemma.model.common.quantitationtype.QuantitationTypeValueObject> getQuantitationTypes()

      • setQuantitationTypes

        public void setQuantitationTypes​(Collection<ubic.gemma.model.common.quantitationtype.QuantitationTypeValueObject> qts)

      • getBioAssays

        public Collection<ubic.gemma.model.expression.bioAssay.BioAssayValueObject> getBioAssays()

      • setBioAssays

        public void setBioAssays​(Collection<ubic.gemma.model.expression.bioAssay.BioAssayValueObject> bioAssays)