Uses of Class
ubic.gemma.model.association.coexpression.Gene2GeneCoexpression

Packages that use Gene2GeneCoexpression

Package	Description
ubic.gemma.model.association.coexpression
ubic.gemma.persistence.service.association.coexpression

Uses of Gene2GeneCoexpression in ubic.gemma.model.association.coexpression

Subclasses of Gene2GeneCoexpression in ubic.gemma.model.association.coexpression

Modifier and Type	Class	Description
class	HumanGeneCoExpression
class	HumanGeneCoExpressionImpl
class	MouseGeneCoExpression
class	MouseGeneCoExpressionImpl
class	OtherGeneCoExpression
class	OtherGeneCoExpressionImpl
class	RatGeneCoExpression
class	RatGeneCoExpressionImpl

Methods in ubic.gemma.model.association.coexpression with parameters of type Gene2GeneCoexpression

Modifier and Type	Method	Description
int	Gene2GeneCoexpression.compareTo(Gene2GeneCoexpression o)

Uses of Gene2GeneCoexpression in ubic.gemma.persistence.service.association.coexpression

Methods in ubic.gemma.persistence.service.association.coexpression that return Gene2GeneCoexpression

Modifier and Type	Method	Description
Gene2GeneCoexpression	LinkCreator.create(double w, Long firstGene, Long secondGene)
Gene2GeneCoexpression	NonPersistentNonOrderedCoexpLink.getLink()

Methods in ubic.gemma.persistence.service.association.coexpression that return types with arguments of type Gene2GeneCoexpression

Modifier and Type	Method	Description
Map<SupportDetails,Gene2GeneCoexpression>	CoexpressionDao.initializeFromOldData(Gene gene, Map<Long,Gene> geneIdMap, Map<NonPersistentNonOrderedCoexpLink,SupportDetails> linksSoFar, Set<Long> skipGenes)
Map<SupportDetails,Gene2GeneCoexpression>	CoexpressionDaoImpl.initializeFromOldData(Gene gene, Map<Long,Gene> geneIdMap, Map<NonPersistentNonOrderedCoexpLink,SupportDetails> linksSoFar, Set<Long> skipGenes)
Map<SupportDetails,Gene2GeneCoexpression>	CoexpressionService.initializeLinksFromOldData(Gene gene, Map<Long,Gene> idMap, Map<NonPersistentNonOrderedCoexpLink,SupportDetails> linksSoFar, Set<Long> skipGenes)
Map<SupportDetails,Gene2GeneCoexpression>	CoexpressionServiceImpl.initializeLinksFromOldData(Gene g, Map<Long,Gene> idMap, Map<NonPersistentNonOrderedCoexpLink,SupportDetails> linksSoFar, Set<Long> skipGenes)

Constructors in ubic.gemma.persistence.service.association.coexpression with parameters of type Gene2GeneCoexpression

Constructor	Description
CoexpressionValueObject(Gene2GeneCoexpression g2g)	Construct a value object.
NonPersistentNonOrderedCoexpLink(Gene2GeneCoexpression link)