Package ubic.gemma.model.analysis.expression.diff

Class DiffExprGeneSearchResult

  • All Implemented Interfaces:
    Serializable
    Direct Known Subclasses:
    MissingResult, NonRetainedResult
    public class DiffExprGeneSearchResult
extends Object
implements Serializable
    Value object for differential expression result for one result - corresponds to the DifferentialExpressionAnalysisResults for one gene in one ResultSet (combined for multiple probes), but represents only the "selected" analysisResult. It can represent a 'dummy' (missing value) if the resultSetId and the geneId are populated.
    Author:
    anton, paul
    See Also:
    Serialized Form

    • Constructor Detail

      • DiffExprGeneSearchResult

        public DiffExprGeneSearchResult​(Long resultSetId,
                                Long geneId)

    • Method Detail

      • getCorrectedPvalue

        public Double getCorrectedPvalue()

      • setCorrectedPvalue

        public void setCorrectedPvalue​(Double correctedPvalue)
        Parameters:
        correctedPvalue - the corrected pvalue (i.e., a q-value)

      • getGeneId

        public long getGeneId()

      • setGeneId

        public void setGeneId​(Long geneId)

      • getNumberOfProbes

        public int getNumberOfProbes()

      • setNumberOfProbes

        public void setNumberOfProbes​(int numberOfProbes)

      • getNumberOfProbesDiffExpressed

        public int getNumberOfProbesDiffExpressed()

      • setNumberOfProbesDiffExpressed

        public void setNumberOfProbesDiffExpressed​(int numberOfProbesDiffExpressed)

      • getPvalue

        public Double getPvalue()

      • setPvalue

        public void setPvalue​(Double pvalue)
        Parameters:
        pvalue - the uncorrected pvalue.

      • getResultId

        public Long getResultId()
        Returns:
        the id of the underlying DifferentialExpressionAnalysisResult. This will be null if there is no result for the resultSet and geneId.

      • setResultId

        public void setResultId​(long resultId)
        Not to be confused with resultSetId.
        Parameters:
        resultId - the ID of the specific result stored.

      • getResultSetId

        public Long getResultSetId()

      • setResultSetId

        public void setResultSetId​(Long resultSetId)

      • getScore

        public Double getScore()

      • setScore

        public void setScore​(Double score)

      • hashCode

        public int hashCode()
        Overrides:
        hashCode in class Object