Package ubic.gemma.web.services

Class GeneCoexpressionSearchEndpoint

java.lang.Object

org.springframework.xml.transform.TransformerObjectSupport

org.springframework.ws.server.endpoint.AbstractDomPayloadEndpoint

ubic.gemma.web.services.AbstractGemmaEndpoint

ubic.gemma.web.services.GeneCoexpressionSearchEndpoint

All Implemented Interfaces:

org.springframework.ws.server.endpoint.PayloadEndpoint

public class GeneCoexpressionSearchEndpoint
extends AbstractGemmaEndpoint

Field Summary

Fields

Modifier and Type	Field	Description
static String	LOCAL_NAME	The local name of the expected request/response.
static int	MAX_RESULTS	The maximum number of coexpression results to return per input gene; a value of zero will return all possible results (ie.

Fields inherited from class ubic.gemma.web.services.AbstractGemmaEndpoint

DELIMITER, manualAuthenticationService, NAMESPACE_URI, REQUEST, RESPONSE

Fields inherited from class org.springframework.xml.transform.TransformerObjectSupport

logger

Constructor Summary

Constructors

Constructor	Description
GeneCoexpressionSearchEndpoint()

Method Summary

Modifier and Type	Method	Description
protected Element	invokeInternal(Element requestElement, Document document)	Reads the given requestElement, and sends a the response back.
void	setExpressionExperimentSetService(ExpressionExperimentSetService service)
void	setGeneCoexpressionSearchService(GeneCoexpressionSearchService geneCoexpressionSearchService)
void	setGeneService(GeneService geneService)
void	setServletContext(javax.servlet.ServletContext servletContext)

Methods inherited from class ubic.gemma.web.services.AbstractGemmaEndpoint

authenticate, buildBadResponse, buildWrapper, encode, getArrayValues, getLastSingleNodeValue, getNodeValue, getOptionalNodeValue, getSingleNodeValue, readReport, readReport, readReport, setLocalName, setManualAuthenticationService, writeReport

Methods inherited from class org.springframework.ws.server.endpoint.AbstractDomPayloadEndpoint

createDocumentBuilder, createDocumentBuilderFactory, getDocumentElement, invoke, setAlwaysTransform, setExpandEntityReferences, setNamespaceAware, setValidating

Methods inherited from class org.springframework.xml.transform.TransformerObjectSupport

createTransformer, getTransformerFactory, newTransformerFactory, setTransformerFactoryClass, transform

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Field Detail

LOCAL_NAME

public static final String LOCAL_NAME

The local name of the expected request/response.

See Also:

Constant Field Values

MAX_RESULTS

public static final int MAX_RESULTS

The maximum number of coexpression results to return per input gene; a value of zero will return all possible results (ie. max is infinity). We limit this to avoid results sets from blowing up ridiculously.

See Also:

Constant Field Values

Constructor Detail

GeneCoexpressionSearchEndpoint

public GeneCoexpressionSearchEndpoint()

Method Detail

setExpressionExperimentSetService

public void setExpressionExperimentSetService(ExpressionExperimentSetService service)

setGeneCoexpressionSearchService

public void setGeneCoexpressionSearchService(GeneCoexpressionSearchService geneCoexpressionSearchService)

setGeneService

public void setGeneService(GeneService geneService)

setServletContext

public void setServletContext(javax.servlet.ServletContext servletContext)

invokeInternal

protected Element invokeInternal(Element requestElement,
                                 Document document)

Reads the given requestElement, and sends a the response back.

Specified by:

invokeInternal in class org.springframework.ws.server.endpoint.AbstractDomPayloadEndpoint

Parameters:

requestElement - the contents of the SOAP message as DOM elements

document - a DOM document to be used for constructing Nodes

Returns:

the response element