CoexpressionAnalysis (Gemma 1.31.11-SNAPSHOT API)

java.lang.Object
- ubic.gemma.model.common.AbstractDescribable
- - ubic.gemma.model.analysis.Analysis
  - - ubic.gemma.model.analysis.expression.ExpressionAnalysis
    - - ubic.gemma.model.analysis.SingleExperimentAnalysis
      - ubic.gemma.model.analysis.expression.coexpression.CoexpressionAnalysis

All Implemented Interfaces:

gemma.gsec.model.Securable, gemma.gsec.model.SecuredChild, Serializable, Securable, SecuredChild, Describable, Identifiable
```
public class CoexpressionAnalysis
extends SingleExperimentAnalysis
```
A coexpression analysis of one experiment. Note that this is used to store meta-data about the analysis, the actual results are not attached to this.

See Also:

Serialized Form

Nested Class Summary

Nested Classes
Modifier and Type Class Description

static class CoexpressionAnalysis.Factory

Constructor Summary

Constructors
Constructor Description

CoexpressionAnalysis()

Method Summary

All Methods Instance Methods Concrete Methods
Modifier and Type	Method	Description
`CoexpCorrelationDistribution`	`getCoexpCorrelationDistribution()`
`Integer`	`getNumberOfLinks()`
`void`	`setCoexpCorrelationDistribution(CoexpCorrelationDistribution coexpCorrelationDistribution)`
`void`	`setNumberOfLinks(Integer numberOfLinks)`

Methods inherited from class ubic.gemma.model.analysis.SingleExperimentAnalysis
getExperimentAnalyzed, getNumberOfElementsAnalyzed, getSecurityOwner, setExperimentAnalyzed, setNumberOfElementsAnalyzed

Methods inherited from class ubic.gemma.model.analysis.Analysis
getProtocol, setProtocol

Methods inherited from class ubic.gemma.model.common.AbstractDescribable
equals, getDescription, getId, getName, hashCode, setDescription, setId, setName, toString

Methods inherited from class java.lang.Object
clone, finalize, getClass, notify, notifyAll, wait, wait, wait

Methods inherited from interface ubic.gemma.model.common.Identifiable
getId

Methods inherited from interface gemma.gsec.model.Securable
getId

Constructor Detail
- CoexpressionAnalysis
```
public CoexpressionAnalysis()
```

Method Detail

getCoexpCorrelationDistribution

public CoexpCorrelationDistribution getCoexpCorrelationDistribution()

setCoexpCorrelationDistribution

public void setCoexpCorrelationDistribution(CoexpCorrelationDistribution coexpCorrelationDistribution)

getNumberOfLinks
```
public Integer getNumberOfLinks()
```
Returns:

The number of links which were stored for this analysis.

setNumberOfLinks
```
public void setNumberOfLinks(Integer numberOfLinks)
```
Parameters:

numberOfLinks - at the gene level.