Package ubic.gemma.model.genome.gene

Class GeneSetValueObject

java.lang.Object

ubic.gemma.model.common.IdentifiableValueObject<GeneSet>

ubic.gemma.model.genome.gene.GeneSetValueObject

All Implemented Interfaces:

gemma.gsec.model.Securable, gemma.gsec.model.SecureValueObject, Serializable, Identifiable

Direct Known Subclasses:

DatabaseBackedGeneSetValueObject, SessionBoundGeneSetValueObject

public class GeneSetValueObject
extends IdentifiableValueObject<GeneSet>
implements gemma.gsec.model.SecureValueObject

Represents a Gene group gene set

Author:

kelsey

See Also:

Serialized Form

Field Summary

Fields inherited from class ubic.gemma.model.common.IdentifiableValueObject

id

Constructor Summary

Constructors

Constructor	Description
GeneSetValueObject()	default constructor to satisfy java bean contract
GeneSetValueObject(Long id)	Create a lightweight wrapper that can be used for security filtering
GeneSetValueObject(GeneSet geneSet, Taxon taxon, Long size)

Method Summary

Modifier and Type	Method	Description
boolean	getCurrentUserIsOwner()
boolean	getIsPublic()
boolean	getIsShared()
Class<? extends Securable>	getSecurableClass()
Long	getSize()
Long	getTaxonId()
String	getTaxonName()
boolean	getUserCanWrite()
boolean	getUserOwned()
void	setIsPublic(boolean isPublic)
void	setIsShared(boolean isShared)
void	setSize(long size)
void	setUserCanWrite(boolean userCanWrite)
String	toString()

Methods inherited from class ubic.gemma.model.common.IdentifiableValueObject

getId, setId

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Methods inherited from interface gemma.gsec.model.Securable

getId

Methods inherited from interface gemma.gsec.model.SecureValueObject

setUserOwned

Constructor Detail

GeneSetValueObject

public GeneSetValueObject()

default constructor to satisfy java bean contract

GeneSetValueObject

public GeneSetValueObject(Long id)

Create a lightweight wrapper that can be used for security filtering

Parameters:

id - id

GeneSetValueObject

public GeneSetValueObject(GeneSet geneSet,
                          @Nullable
                          Taxon taxon,
                          @Nullable
                          Long size)

Method Detail

getTaxonId

public Long getTaxonId()

getTaxonName

public String getTaxonName()

getSize

public Long getSize()

Returns:

the number of members in the group

setSize

public void setSize(long size)

getCurrentUserIsOwner

public boolean getCurrentUserIsOwner()

getUserOwned

public boolean getUserOwned()

Specified by:

getUserOwned in interface gemma.gsec.model.SecureValueObject

getUserCanWrite

public boolean getUserCanWrite()

Specified by:

getUserCanWrite in interface gemma.gsec.model.SecureValueObject

setUserCanWrite

public void setUserCanWrite(boolean userCanWrite)

Specified by:

setUserCanWrite in interface gemma.gsec.model.SecureValueObject

getIsPublic

public boolean getIsPublic()

Specified by:

getIsPublic in interface gemma.gsec.model.SecureValueObject

setIsPublic

public void setIsPublic(boolean isPublic)

Specified by:

setIsPublic in interface gemma.gsec.model.SecureValueObject

getIsShared

public boolean getIsShared()

Specified by:

getIsShared in interface gemma.gsec.model.SecureValueObject

setIsShared

public void setIsShared(boolean isShared)

Specified by:

setIsShared in interface gemma.gsec.model.SecureValueObject

getSecurableClass

public Class<? extends Securable> getSecurableClass()

Specified by:

getSecurableClass in interface gemma.gsec.model.SecureValueObject

toString

public String toString()

Overrides:

toString in class IdentifiableValueObject<GeneSet>