Package ubic.gemma.model.expression.experiment

Class GeeqValueObject

java.lang.Object

ubic.gemma.model.common.IdentifiableValueObject<Geeq>

ubic.gemma.model.expression.experiment.GeeqValueObject

All Implemented Interfaces:

Serializable, Identifiable

Direct Known Subclasses:

GeeqAdminValueObject

public class GeeqValueObject
extends IdentifiableValueObject<Geeq>

Represents publicly available geeq information

Author:

paul, tesarst

See Also:

Serialized Form

Field Summary

Fields inherited from class ubic.gemma.model.common.IdentifiableValueObject

id

Constructor Summary

Constructors

Constructor	Description
GeeqValueObject()	Required when using the class as a spring bean
GeeqValueObject(Geeq g)

Method Summary

Modifier and Type	Method	Description
byte	getCorrMatIssues()
double	getPublicQualityScore()
double	getPublicSuitabilityScore()
double	getqScoreBatchInfo()
double	getqScoreOutliers()
double	getqScorePlatformsTech()
double	getqScorePublicBatchConfound()
double	getqScorePublicBatchEffect()
double	getqScoreReplicates()
double	getqScoreSampleCorrelationVariance()
double	getqScoreSampleMeanCorrelation()
double	getqScoreSampleMedianCorrelation()
byte	getReplicatesIssues()
double	getsScoreAvgPlatformPopularity()
double	getsScoreAvgPlatformSize()
double	getsScoreMissingValues()
double	getsScorePlatformAmount()
double	getsScorePlatformsTechMulti()
double	getsScorePublication()
double	getsScoreRawData()
double	getsScoreSampleSize()
boolean	isBatchCorrected()
boolean	isNoVectors()

Methods inherited from class ubic.gemma.model.common.IdentifiableValueObject

getId, setId, toString

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait

Constructor Detail

GeeqValueObject

public GeeqValueObject()

Required when using the class as a spring bean

GeeqValueObject

public GeeqValueObject(Geeq g)

Method Detail

getPublicQualityScore

public double getPublicQualityScore()

getPublicSuitabilityScore

public double getPublicSuitabilityScore()

getsScorePublication

public double getsScorePublication()

getsScorePlatformAmount

public double getsScorePlatformAmount()

getsScorePlatformsTechMulti

public double getsScorePlatformsTechMulti()

getsScoreAvgPlatformPopularity

public double getsScoreAvgPlatformPopularity()

getsScoreAvgPlatformSize

public double getsScoreAvgPlatformSize()

getsScoreSampleSize

public double getsScoreSampleSize()

getsScoreRawData

public double getsScoreRawData()

getsScoreMissingValues

public double getsScoreMissingValues()

getqScoreOutliers

public double getqScoreOutliers()

getqScoreSampleMeanCorrelation

public double getqScoreSampleMeanCorrelation()

getqScoreSampleMedianCorrelation

public double getqScoreSampleMedianCorrelation()

getqScoreSampleCorrelationVariance

public double getqScoreSampleCorrelationVariance()

getqScorePlatformsTech

public double getqScorePlatformsTech()

getqScoreReplicates

public double getqScoreReplicates()

getqScoreBatchInfo

public double getqScoreBatchInfo()

getqScorePublicBatchEffect

public double getqScorePublicBatchEffect()

getqScorePublicBatchConfound

public double getqScorePublicBatchConfound()

isNoVectors

public boolean isNoVectors()

getCorrMatIssues

public byte getCorrMatIssues()

getReplicatesIssues

public byte getReplicatesIssues()

isBatchCorrected

public boolean isBatchCorrected()