Package ubic.gemma.web.services

Class ExperimentDEDVEndpoint

java.lang.Object

org.springframework.xml.transform.TransformerObjectSupport

org.springframework.ws.server.endpoint.AbstractDomPayloadEndpoint

ubic.gemma.web.services.AbstractGemmaEndpoint

ubic.gemma.web.services.ExperimentDEDVEndpoint

All Implemented Interfaces:

org.springframework.ws.server.endpoint.PayloadEndpoint

public class ExperimentDEDVEndpoint
extends AbstractGemmaEndpoint

Allows access to all the Design Element Data Vectors (DEDV's) for a given Expression Experiment. Returns the DEDV's and the genes that might be responsible for that DEDV

Author:

klc, gavin

Field Summary

Fields inherited from class ubic.gemma.web.services.AbstractGemmaEndpoint

DELIMITER, manualAuthenticationService, NAMESPACE_URI, REQUEST, RESPONSE

Fields inherited from class org.springframework.xml.transform.TransformerObjectSupport

logger

Constructor Summary

Constructors

Constructor	Description
ExperimentDEDVEndpoint()

Method Summary

Modifier and Type	Method	Description
protected Element	invokeInternal(Element requestElement, Document document)	Reads the given requestElement, and sends a the response back.
void	setCompositeSequenceService(ubic.gemma.persistence.service.expression.designElement.CompositeSequenceService compositeSequenceService)
void	setExpressionDataMatrixService(ubic.gemma.core.analysis.service.ExpressionDataMatrixService expressionDataMatrixService)
void	setExpressionExperimentService(ubic.gemma.persistence.service.expression.experiment.ExpressionExperimentService ees)	Sets the "business service" to delegate to.

Methods inherited from class ubic.gemma.web.services.AbstractGemmaEndpoint

authenticate, buildBadResponse, buildWrapper, encode, getArrayValues, getLastSingleNodeValue, getNodeValue, getOptionalNodeValue, getSingleNodeValue, readReport, readReport, readReport, setLocalName, setManualAuthenticationService, writeReport

Methods inherited from class org.springframework.ws.server.endpoint.AbstractDomPayloadEndpoint

createDocumentBuilder, createDocumentBuilderFactory, getDocumentElement, invoke, setAlwaysTransform, setExpandEntityReferences, setNamespaceAware, setValidating

Methods inherited from class org.springframework.xml.transform.TransformerObjectSupport

createTransformer, getTransformerFactory, newTransformerFactory, setTransformerFactoryClass, transform

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ExperimentDEDVEndpoint

public ExperimentDEDVEndpoint()

Method Detail

setCompositeSequenceService

public void setCompositeSequenceService(ubic.gemma.persistence.service.expression.designElement.CompositeSequenceService compositeSequenceService)

setExpressionDataMatrixService

public void setExpressionDataMatrixService(ubic.gemma.core.analysis.service.ExpressionDataMatrixService expressionDataMatrixService)

setExpressionExperimentService

public void setExpressionExperimentService(ubic.gemma.persistence.service.expression.experiment.ExpressionExperimentService ees)

Sets the "business service" to delegate to.

invokeInternal

protected Element invokeInternal(Element requestElement,
                                 Document document)
                          throws Exception

Reads the given requestElement, and sends a the response back.

Specified by:

invokeInternal in class org.springframework.ws.server.endpoint.AbstractDomPayloadEndpoint

Parameters:

requestElement - the contents of the SOAP message as DOM elements

document - a DOM document to be used for constructing Nodes

Returns:

the response element

Throws:

Exception