Package ubic.gemma.web.controller.common.description.bibref

Class BibliographicReferenceControllerImpl

java.lang.Object

ubic.gemma.web.controller.BaseController

ubic.gemma.web.controller.common.description.bibref.BibliographicReferenceControllerImpl

All Implemented Interfaces:

BibliographicReferenceController

@Controller
public class BibliographicReferenceControllerImpl
extends BaseController
implements BibliographicReferenceController

This controller is responsible for showing a list of all bibliographic references, as well sending the user to the pubMed.Detail.view when they click on a specific link in that list.

Author:

keshav

Field Summary

Fields inherited from class ubic.gemma.web.controller.BaseController

log

Constructor Summary

Constructors

Constructor	Description
BibliographicReferenceControllerImpl()

Method Summary

Modifier and Type	Method	Description
ModelAndView	add(javax.servlet.http.HttpServletRequest request, javax.servlet.http.HttpServletResponse response)
JsonReaderResponse<ubic.gemma.model.common.description.BibliographicReferenceValueObject>	browse(ListBatchCommand batch)
ModelAndView	delete(javax.servlet.http.HttpServletRequest request, javax.servlet.http.HttpServletResponse response)
ubic.gemma.model.common.description.BibliographicReferenceValueObject	load(Long id)
Collection<ubic.gemma.model.common.description.BibliographicReferenceValueObject>	loadAllForExperiments()
ubic.gemma.model.common.description.BibliographicReferenceValueObject	loadFromPubmedID(String pubMedID)
JsonReaderResponse<ubic.gemma.model.common.description.BibliographicReferenceValueObject>	loadMultiple(Collection<Long> ids)
JsonReaderResponse<ubic.gemma.model.common.description.BibliographicReferenceValueObject>	search(ubic.gemma.model.common.search.SearchSettingsValueObject settings)
ModelAndView	searchBibRefs(javax.servlet.http.HttpServletRequest request, javax.servlet.http.HttpServletResponse response)
void	setBibliographicReferenceService(ubic.gemma.core.annotation.reference.BibliographicReferenceService bibliographicReferenceService)
void	setPersisterHelper(ubic.gemma.persistence.persister.Persister persisterHelper)
ModelAndView	show(javax.servlet.http.HttpServletRequest request, javax.servlet.http.HttpServletResponse response)
ModelAndView	showAllForExperiments(javax.servlet.http.HttpServletRequest request, javax.servlet.http.HttpServletResponse response)
ubic.gemma.model.common.description.BibliographicReferenceValueObject	update(String pubMedId)

Methods inherited from class ubic.gemma.web.controller.BaseController

addMessage, getMessageUtil, getText, getText, saveMessage, saveMessage, sendConfirmationEmail, setMailEngine, setMessageSource, setMessageUtil

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

BibliographicReferenceControllerImpl

public BibliographicReferenceControllerImpl()

Method Detail

add

public ModelAndView add(javax.servlet.http.HttpServletRequest request,
                        javax.servlet.http.HttpServletResponse response)

Specified by:

add in interface BibliographicReferenceController

browse

public JsonReaderResponse<ubic.gemma.model.common.description.BibliographicReferenceValueObject> browse(ListBatchCommand batch)

Specified by:

browse in interface BibliographicReferenceController

delete

public ModelAndView delete(javax.servlet.http.HttpServletRequest request,
                           javax.servlet.http.HttpServletResponse response)

Specified by:

delete in interface BibliographicReferenceController

load

public ubic.gemma.model.common.description.BibliographicReferenceValueObject load(Long id)

Specified by:

load in interface BibliographicReferenceController

loadAllForExperiments

public Collection<ubic.gemma.model.common.description.BibliographicReferenceValueObject> loadAllForExperiments()

Specified by:

loadAllForExperiments in interface BibliographicReferenceController

loadFromPubmedID

public ubic.gemma.model.common.description.BibliographicReferenceValueObject loadFromPubmedID(String pubMedID)

Specified by:

loadFromPubmedID in interface BibliographicReferenceController

loadMultiple

public JsonReaderResponse<ubic.gemma.model.common.description.BibliographicReferenceValueObject> loadMultiple(Collection<Long> ids)

Specified by:

loadMultiple in interface BibliographicReferenceController

search

public JsonReaderResponse<ubic.gemma.model.common.description.BibliographicReferenceValueObject> search(ubic.gemma.model.common.search.SearchSettingsValueObject settings)

Specified by:

search in interface BibliographicReferenceController

searchBibRefs

public ModelAndView searchBibRefs(javax.servlet.http.HttpServletRequest request,
                                  javax.servlet.http.HttpServletResponse response)

Specified by:

searchBibRefs in interface BibliographicReferenceController

show

public ModelAndView show(javax.servlet.http.HttpServletRequest request,
                         javax.servlet.http.HttpServletResponse response)

Specified by:

show in interface BibliographicReferenceController

showAllForExperiments

public ModelAndView showAllForExperiments(javax.servlet.http.HttpServletRequest request,
                                          javax.servlet.http.HttpServletResponse response)

Specified by:

showAllForExperiments in interface BibliographicReferenceController

update

public ubic.gemma.model.common.description.BibliographicReferenceValueObject update(String pubMedId)

Specified by:

update in interface BibliographicReferenceController

setBibliographicReferenceService

public void setBibliographicReferenceService(ubic.gemma.core.annotation.reference.BibliographicReferenceService bibliographicReferenceService)

Parameters:

bibliographicReferenceService - The bibliographicReferenceService to set.

setPersisterHelper

public void setPersisterHelper(ubic.gemma.persistence.persister.Persister persisterHelper)