Gemma

Parent Project

• pavlab-starter-parent

Modules

• Gemma Core
• Gemma CLI
• Gemma Web

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  • Dependency Convergence
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Reactor Dependency Convergence

Legend:

At least one dependency has a differing version of the dependency or has SNAPSHOT dependencies.

Statistics:

Number of modules:	4
Number of dependencies (NOD):	234
Number of unique artifacts (NOA):	279
Number of version-conflicting artifacts (NOC):	27
Number of SNAPSHOT artifacts (NOS):	0
Convergence (NOD/NOA):	83 %
Ready for release (100% convergence and no SNAPSHOTS):	Error You do not have 100% convergence.

Dependencies used in modules

com.fasterxml.jackson.core:jackson-annotations

2.14.0 gemma:gemma-web:war:1.29.1 +- io.swagger.core.v3:swagger-core:jar:2.2.7:compile |  +- (com.fasterxml.jackson.core:jackson-annotations:jar:2.14.0:compile - omitted for conflict with 2.14.1) |  \- com.fasterxml.jackson.datatype:jackson-datatype-jsr310:jar:2.14.0:compile |     \- (com.fasterxml.jackson.core:jackson-annotations:jar:2.14.0:compile - omitted for conflict with 2.14.1) \- io.swagger.core.v3:swagger-models:jar:2.2.7:compile    \- (com.fasterxml.jackson.core:jackson-annotations:jar:2.14.0:compile - omitted for conflict with 2.14.1) 2.14.1 gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  \- (com.fasterxml.jackson.core:jackson-annotations:jar:2.14.1:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (com.fasterxml.jackson.core:jackson-annotations:jar:2.14.1:test - omitted for duplicate) +- com.fasterxml.jackson.core:jackson-annotations:jar:2.14.1:compile \- com.fasterxml.jackson.core:jackson-databind:jar:2.14.1:compile    \- (com.fasterxml.jackson.core:jackson-annotations:jar:2.14.1:compile - omitted for duplicate) 2.8.0 gemma:gemma-web:war:1.29.1 \- org.glassfish.jersey.media:jersey-media-json-jackson:jar:2.25.1:compile    \- com.fasterxml.jackson.jaxrs:jackson-jaxrs-json-provider:jar:2.8.4:compile       \- com.fasterxml.jackson.module:jackson-module-jaxb-annotations:jar:2.8.4:compile          \- (com.fasterxml.jackson.core:jackson-annotations:jar:2.8.0:compile - omitted for conflict with 2.14.1) 2.8.4 gemma:gemma-web:war:1.29.1 \- org.glassfish.jersey.media:jersey-media-json-jackson:jar:2.25.1:compile    \- (com.fasterxml.jackson.core:jackson-annotations:jar:2.8.4:compile - omitted for conflict with 2.14.1)

com.fasterxml.jackson.core:jackson-core

2.14.0 gemma:gemma-web:war:1.29.1 \- io.swagger.core.v3:swagger-core:jar:2.2.7:compile    +- com.fasterxml.jackson.dataformat:jackson-dataformat-yaml:jar:2.14.0:compile    |  \- (com.fasterxml.jackson.core:jackson-core:jar:2.14.0:compile - omitted for conflict with 2.14.1)    \- com.fasterxml.jackson.datatype:jackson-datatype-jsr310:jar:2.14.0:compile       \- (com.fasterxml.jackson.core:jackson-core:jar:2.14.0:compile - omitted for conflict with 2.14.1) 2.14.1 gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  \- (com.fasterxml.jackson.core:jackson-core:jar:2.14.1:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (com.fasterxml.jackson.core:jackson-core:jar:2.14.1:test - omitted for duplicate) +- com.fasterxml.jackson.core:jackson-core:jar:2.14.1:compile \- com.fasterxml.jackson.core:jackson-databind:jar:2.14.1:compile    \- (com.fasterxml.jackson.core:jackson-core:jar:2.14.1:compile - omitted for duplicate) 2.8.4 gemma:gemma-web:war:1.29.1 \- org.glassfish.jersey.media:jersey-media-json-jackson:jar:2.25.1:compile    +- com.fasterxml.jackson.jaxrs:jackson-jaxrs-base:jar:2.8.4:compile    |  \- (com.fasterxml.jackson.core:jackson-core:jar:2.8.4:compile - omitted for conflict with 2.14.1)    \- com.fasterxml.jackson.jaxrs:jackson-jaxrs-json-provider:jar:2.8.4:compile       +- (com.fasterxml.jackson.core:jackson-core:jar:2.8.4:compile - omitted for conflict with 2.14.1)       \- com.fasterxml.jackson.module:jackson-module-jaxb-annotations:jar:2.8.4:compile          \- (com.fasterxml.jackson.core:jackson-core:jar:2.8.4:compile - omitted for conflict with 2.14.1)

com.fasterxml.jackson.core:jackson-databind

2.14.0 gemma:gemma-web:war:1.29.1 +- io.swagger.core.v3:swagger-core:jar:2.2.7:compile |  +- (com.fasterxml.jackson.core:jackson-databind:jar:2.14.0:compile - omitted for conflict with 2.14.1) |  +- com.fasterxml.jackson.dataformat:jackson-dataformat-yaml:jar:2.14.0:compile |  |  \- (com.fasterxml.jackson.core:jackson-databind:jar:2.14.0:compile - omitted for conflict with 2.14.1) |  \- com.fasterxml.jackson.datatype:jackson-datatype-jsr310:jar:2.14.0:compile |     \- (com.fasterxml.jackson.core:jackson-databind:jar:2.14.0:compile - omitted for conflict with 2.14.1) \- io.swagger.core.v3:swagger-jaxrs2:jar:2.2.7:compile    \- (com.fasterxml.jackson.core:jackson-databind:jar:2.14.0:compile - omitted for conflict with 2.14.1) 2.14.1 gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  \- (com.fasterxml.jackson.core:jackson-databind:jar:2.14.1:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (com.fasterxml.jackson.core:jackson-databind:jar:2.14.1:test - omitted for duplicate) \- com.fasterxml.jackson.core:jackson-databind:jar:2.14.1:compile 2.8.4 gemma:gemma-web:war:1.29.1 \- org.glassfish.jersey.media:jersey-media-json-jackson:jar:2.25.1:compile    +- com.fasterxml.jackson.jaxrs:jackson-jaxrs-base:jar:2.8.4:compile    |  \- (com.fasterxml.jackson.core:jackson-databind:jar:2.8.4:compile - omitted for conflict with 2.14.1)    \- com.fasterxml.jackson.jaxrs:jackson-jaxrs-json-provider:jar:2.8.4:compile       +- (com.fasterxml.jackson.core:jackson-databind:jar:2.8.4:compile - omitted for conflict with 2.14.1)       \- com.fasterxml.jackson.module:jackson-module-jaxb-annotations:jar:2.8.4:compile          \- (com.fasterxml.jackson.core:jackson-databind:jar:2.8.4:compile - omitted for conflict with 2.14.1)

com.fasterxml.jackson.jaxrs:jackson-jaxrs-json-provider

2.14.0 gemma:gemma-web:war:1.29.1 \- io.swagger.core.v3:swagger-jaxrs2:jar:2.2.7:compile    \- (com.fasterxml.jackson.jaxrs:jackson-jaxrs-json-provider:jar:2.14.0:compile - omitted for conflict with 2.8.4) 2.8.4 gemma:gemma-web:war:1.29.1 \- org.glassfish.jersey.media:jersey-media-json-jackson:jar:2.25.1:compile    \- com.fasterxml.jackson.jaxrs:jackson-jaxrs-json-provider:jar:2.8.4:compile

com.github.fommil.netlib:core

1.1 gemma:gemma-cli:jar:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- com.googlecode.matrix-toolkits-java:mtj:jar:1.0.4:compile       \- com.github.fommil.netlib:all:pom:1.1.2:compile          +- com.github.fommil.netlib:netlib-native_ref-osx-x86_64:jar:natives:1.1:compile          |  \- com.github.fommil.netlib:native_ref-java:jar:1.1:compile          |     \- (com.github.fommil.netlib:core:jar:1.1:compile - omitted for conflict with 1.1.2)          \- com.github.fommil.netlib:netlib-native_system-osx-x86_64:jar:natives:1.1:compile             \- com.github.fommil.netlib:native_system-java:jar:1.1:compile                \- (com.github.fommil.netlib:core:jar:1.1:compile - omitted for conflict with 1.1.2) gemma:gemma-core:jar:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- com.googlecode.matrix-toolkits-java:mtj:jar:1.0.4:compile       \- com.github.fommil.netlib:all:pom:1.1.2:compile          +- com.github.fommil.netlib:netlib-native_ref-osx-x86_64:jar:natives:1.1:compile          |  \- com.github.fommil.netlib:native_ref-java:jar:1.1:compile          |     \- (com.github.fommil.netlib:core:jar:1.1:compile - omitted for conflict with 1.1.2)          \- com.github.fommil.netlib:netlib-native_system-osx-x86_64:jar:natives:1.1:compile             \- com.github.fommil.netlib:native_system-java:jar:1.1:compile                \- (com.github.fommil.netlib:core:jar:1.1:compile - omitted for conflict with 1.1.2) gemma:gemma-web:war:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- com.googlecode.matrix-toolkits-java:mtj:jar:1.0.4:compile       \- com.github.fommil.netlib:all:pom:1.1.2:compile          +- com.github.fommil.netlib:netlib-native_ref-osx-x86_64:jar:natives:1.1:compile          |  \- com.github.fommil.netlib:native_ref-java:jar:1.1:compile          |     \- (com.github.fommil.netlib:core:jar:1.1:compile - omitted for conflict with 1.1.2)          \- com.github.fommil.netlib:netlib-native_system-osx-x86_64:jar:natives:1.1:compile             \- com.github.fommil.netlib:native_system-java:jar:1.1:compile                \- (com.github.fommil.netlib:core:jar:1.1:compile - omitted for conflict with 1.1.2) gemma:gemma:pom:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- com.googlecode.matrix-toolkits-java:mtj:jar:1.0.4:compile       \- com.github.fommil.netlib:all:pom:1.1.2:compile          +- com.github.fommil.netlib:netlib-native_ref-osx-x86_64:jar:natives:1.1:compile          |  \- com.github.fommil.netlib:native_ref-java:jar:1.1:compile          |     \- (com.github.fommil.netlib:core:jar:1.1:compile - omitted for conflict with 1.1.2)          \- com.github.fommil.netlib:netlib-native_system-osx-x86_64:jar:natives:1.1:compile             \- com.github.fommil.netlib:native_system-java:jar:1.1:compile                \- (com.github.fommil.netlib:core:jar:1.1:compile - omitted for conflict with 1.1.2) 1.1.2 gemma:gemma-cli:jar:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- com.googlecode.matrix-toolkits-java:mtj:jar:1.0.4:compile       \- com.github.fommil.netlib:all:pom:1.1.2:compile          \- com.github.fommil.netlib:core:jar:1.1.2:compile gemma:gemma-core:jar:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- com.googlecode.matrix-toolkits-java:mtj:jar:1.0.4:compile       \- com.github.fommil.netlib:all:pom:1.1.2:compile          \- com.github.fommil.netlib:core:jar:1.1.2:compile gemma:gemma-web:war:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- com.googlecode.matrix-toolkits-java:mtj:jar:1.0.4:compile       \- com.github.fommil.netlib:all:pom:1.1.2:compile          \- com.github.fommil.netlib:core:jar:1.1.2:compile gemma:gemma:pom:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- com.googlecode.matrix-toolkits-java:mtj:jar:1.0.4:compile       \- com.github.fommil.netlib:all:pom:1.1.2:compile          \- com.github.fommil.netlib:core:jar:1.1.2:compile

commons-codec:commons-codec

1.11 gemma:gemma:pom:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- org.apache.httpcomponents:httpclient:jar:4.5.13:compile       \- (commons-codec:commons-codec:jar:1.11:compile - omitted for conflict with 1.15) 1.15 gemma:gemma-cli:jar:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- org.apache.poi:poi:jar:5.2.2:compile       \- (commons-codec:commons-codec:jar:1.15:compile - omitted for conflict with 1.5) gemma:gemma-core:jar:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- org.apache.poi:poi:jar:5.2.2:compile       \- (commons-codec:commons-codec:jar:1.15:compile - omitted for conflict with 1.5) gemma:gemma-web:war:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- org.apache.poi:poi:jar:5.2.2:compile       \- (commons-codec:commons-codec:jar:1.15:compile - omitted for conflict with 1.5) gemma:gemma:pom:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- org.apache.poi:poi:jar:5.2.2:compile       \- commons-codec:commons-codec:jar:1.15:compile 1.2 gemma:gemma-web:war:1.29.1 \- rome:rome-fetcher:jar:1.0:compile    \- commons-httpclient:commons-httpclient:jar:3.0.1:compile       \- (commons-codec:commons-codec:jar:1.2:compile - omitted for conflict with 1.5) 1.4 gemma:gemma-core:jar:1.29.1 \- org.apache.jena:jena-arq:jar:2.9.4:compile    \- org.apache.httpcomponents:httpclient:jar:4.1.2:compile       \- (commons-codec:commons-codec:jar:1.4:compile - omitted for conflict with 1.5) 1.5 gemma:gemma-cli:jar:1.29.1 \- gemma:gemma-core:jar:1.29.1:compile    \- org.apache.jena:jena-arq:jar:2.9.4:compile       \- commons-codec:commons-codec:jar:1.5:compile gemma:gemma-core:jar:1.29.1 \- org.apache.jena:jena-arq:jar:2.9.4:compile    \- commons-codec:commons-codec:jar:1.5:compile gemma:gemma-web:war:1.29.1 \- gemma:gemma-core:jar:1.29.1:compile    \- org.apache.jena:jena-arq:jar:2.9.4:compile       \- commons-codec:commons-codec:jar:1.5:compile

commons-collections:commons-collections

3.2.1 gemma:gemma-core:jar:1.29.1 \- org.apache.velocity:velocity:jar:1.7:compile    \- (commons-collections:commons-collections:jar:3.2.1:compile - omitted for conflict with 3.2.2) 3.2.2 gemma:gemma-core:jar:1.29.1 +- commons-beanutils:commons-beanutils:jar:1.9.4:compile |  \- (commons-collections:commons-collections:jar:3.2.2:compile - omitted for conflict with 3.2.1) \- commons-collections:commons-collections:jar:3.2.2:runtime (scope not updated to compile)

commons-io:commons-io

2.11.0 gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  +- ubc.chibi.compass-fork:compass-fork:jar:1.2.0:compile |  |  \- (commons-io:commons-io:jar:2.11.0:compile - omitted for duplicate) |  \- (commons-io:commons-io:jar:2.11.0:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (commons-io:commons-io:jar:2.11.0:test - omitted for duplicate) +- baseCode:baseCode:jar:1.1.5:compile |  +- org.apache.poi:poi:jar:5.2.2:compile |  |  \- (commons-io:commons-io:jar:2.11.0:compile - omitted for duplicate) |  \- (commons-io:commons-io:jar:2.11.0:compile - omitted for duplicate) \- commons-io:commons-io:jar:2.11.0:compile 2.2 gemma:gemma-web:war:1.29.1 \- commons-fileupload:commons-fileupload:jar:1.4:compile    \- (commons-io:commons-io:jar:2.2:compile - omitted for conflict with 2.11.0)

commons-logging:commons-logging-api

1.0.4 gemma:gemma-web:war:1.29.1 \- rome:rome-fetcher:jar:1.0:compile    \- (commons-logging:commons-logging-api:jar:1.0.4:compile - omitted for conflict with 1.1) 1.1 gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  \- (commons-logging:commons-logging-api:jar:1.1:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (commons-logging:commons-logging-api:jar:1.1:test - omitted for duplicate) \- commons-logging:commons-logging-api:jar:1.1:compile

net.bytebuddy:byte-buddy

1.12.10 gemma:gemma-cli:jar:1.29.1 \- org.assertj:assertj-core:jar:3.23.1:test    \- (net.bytebuddy:byte-buddy:jar:1.12.10:test - omitted for conflict with 1.12.16) gemma:gemma-core:jar:1.29.1 \- org.assertj:assertj-core:jar:3.23.1:test    \- (net.bytebuddy:byte-buddy:jar:1.12.10:test - omitted for conflict with 1.12.16) gemma:gemma-web:war:1.29.1 \- org.assertj:assertj-core:jar:3.23.1:test    \- (net.bytebuddy:byte-buddy:jar:1.12.10:test - omitted for conflict with 1.12.16) gemma:gemma:pom:1.29.1 \- org.assertj:assertj-core:jar:3.23.1:test    \- (net.bytebuddy:byte-buddy:jar:1.12.10:test - omitted for conflict with 1.12.16) 1.12.16 gemma:gemma-cli:jar:1.29.1 \- org.mockito:mockito-core:jar:4.8.1:test    \- net.bytebuddy:byte-buddy:jar:1.12.16:test gemma:gemma-core:jar:1.29.1 \- org.mockito:mockito-core:jar:4.8.1:test    \- net.bytebuddy:byte-buddy:jar:1.12.16:test gemma:gemma-web:war:1.29.1 \- org.mockito:mockito-core:jar:4.8.1:test    \- net.bytebuddy:byte-buddy:jar:1.12.16:test gemma:gemma:pom:1.29.1 \- org.mockito:mockito-core:jar:4.8.1:test    \- net.bytebuddy:byte-buddy:jar:1.12.16:test

org.apache.commons:commons-text

1.10.0 gemma:gemma-cli:jar:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  \- (org.apache.commons:commons-text:jar:1.10.0:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (org.apache.commons:commons-text:jar:1.10.0:test - omitted for duplicate) +- baseCode:baseCode:jar:1.1.5:compile |  \- com.opencsv:opencsv:jar:5.7.1:compile |     \- (org.apache.commons:commons-text:jar:1.10.0:compile - omitted for duplicate) \- org.apache.commons:commons-text:jar:1.10.0:compile gemma:gemma-core:jar:1.29.1 +- baseCode:baseCode:jar:1.1.5:compile |  \- com.opencsv:opencsv:jar:5.7.1:compile |     \- (org.apache.commons:commons-text:jar:1.10.0:compile - omitted for conflict with 1.9) \- org.apache.commons:commons-text:jar:1.10.0:compile gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  \- (org.apache.commons:commons-text:jar:1.10.0:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (org.apache.commons:commons-text:jar:1.10.0:test - omitted for duplicate) +- baseCode:baseCode:jar:1.1.5:compile |  \- com.opencsv:opencsv:jar:5.7.1:compile |     \- (org.apache.commons:commons-text:jar:1.10.0:compile - omitted for duplicate) \- org.apache.commons:commons-text:jar:1.10.0:compile gemma:gemma:pom:1.29.1 +- baseCode:baseCode:jar:1.1.5:compile |  \- com.opencsv:opencsv:jar:5.7.1:compile |     \- (org.apache.commons:commons-text:jar:1.10.0:compile - omitted for conflict with 1.9) \- org.apache.commons:commons-text:jar:1.10.0:compile 1.9 gemma:gemma-cli:jar:1.29.1 \- org.apache.commons:commons-configuration2:jar:2.8.0:compile    \- (org.apache.commons:commons-text:jar:1.9:compile - omitted for conflict with 1.10.0) gemma:gemma-core:jar:1.29.1 \- org.apache.commons:commons-configuration2:jar:2.8.0:compile    \- (org.apache.commons:commons-text:jar:1.9:compile - omitted for conflict with 1.10.0) gemma:gemma-web:war:1.29.1 \- org.apache.commons:commons-configuration2:jar:2.8.0:compile    \- (org.apache.commons:commons-text:jar:1.9:compile - omitted for conflict with 1.10.0) gemma:gemma:pom:1.29.1 \- org.apache.commons:commons-configuration2:jar:2.8.0:compile    \- (org.apache.commons:commons-text:jar:1.9:compile - omitted for conflict with 1.10.0)

org.apache.httpcomponents:httpclient

4.1.2 gemma:gemma-cli:jar:1.29.1 \- gemma:gemma-core:jar:1.29.1:compile    \- org.apache.jena:jena-arq:jar:2.9.4:compile       \- (org.apache.httpcomponents:httpclient:jar:4.1.2:compile - omitted for conflict with 4.5.13) gemma:gemma-core:jar:1.29.1 \- org.apache.jena:jena-arq:jar:2.9.4:compile    \- org.apache.httpcomponents:httpclient:jar:4.1.2:compile gemma:gemma-web:war:1.29.1 \- gemma:gemma-core:jar:1.29.1:compile    \- org.apache.jena:jena-arq:jar:2.9.4:compile       \- (org.apache.httpcomponents:httpclient:jar:4.1.2:compile - omitted for conflict with 4.5.13) 4.5.13 gemma:gemma-cli:jar:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- org.apache.httpcomponents:httpclient:jar:4.5.13:compile gemma:gemma-core:jar:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- (org.apache.httpcomponents:httpclient:jar:4.5.13:compile - omitted for conflict with 4.1.2) gemma:gemma-web:war:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- org.apache.httpcomponents:httpclient:jar:4.5.13:compile

org.apache.httpcomponents:httpcore

4.1.2 gemma:gemma-core:jar:1.29.1 \- org.apache.jena:jena-arq:jar:2.9.4:compile    \- org.apache.httpcomponents:httpclient:jar:4.1.2:compile       \- (org.apache.httpcomponents:httpcore:jar:4.1.2:compile - omitted for conflict with 4.1.3) 4.1.3 gemma:gemma-cli:jar:1.29.1 \- gemma:gemma-core:jar:1.29.1:compile    \- org.apache.jena:jena-arq:jar:2.9.4:compile       \- (org.apache.httpcomponents:httpcore:jar:4.1.3:compile - omitted for conflict with 4.4.15) gemma:gemma-core:jar:1.29.1 \- org.apache.jena:jena-arq:jar:2.9.4:compile    \- org.apache.httpcomponents:httpcore:jar:4.1.3:compile gemma:gemma-web:war:1.29.1 \- gemma:gemma-core:jar:1.29.1:compile    \- org.apache.jena:jena-arq:jar:2.9.4:compile       \- (org.apache.httpcomponents:httpcore:jar:4.1.3:compile - omitted for conflict with 4.4.15) 4.4.13 gemma:gemma:pom:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- org.apache.httpcomponents:httpclient:jar:4.5.13:compile       \- (org.apache.httpcomponents:httpcore:jar:4.4.13:compile - omitted for conflict with 4.4.15) 4.4.15 gemma:gemma-cli:jar:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- org.apache.httpcomponents:httpcore:jar:4.4.15:compile gemma:gemma-core:jar:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- (org.apache.httpcomponents:httpcore:jar:4.4.15:compile - omitted for conflict with 4.1.3) gemma:gemma-web:war:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- org.apache.httpcomponents:httpcore:jar:4.4.15:compile gemma:gemma:pom:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- org.apache.httpcomponents:httpcore:jar:4.4.15:compile

org.apache.jena:jena-arq

2.9.0-incubating gemma:gemma-cli:jar:1.29.1 \- gemma:gemma-core:jar:1.29.1:compile    \- org.apache.jena:jena-larq:jar:1.0.0-incubating:compile       \- (org.apache.jena:jena-arq:jar:2.9.0-incubating:compile - omitted for conflict with 2.9.4) gemma:gemma-core:jar:1.29.1 \- org.apache.jena:jena-larq:jar:1.0.0-incubating:compile    \- (org.apache.jena:jena-arq:jar:2.9.0-incubating:compile - omitted for conflict with 2.9.4) gemma:gemma-web:war:1.29.1 \- gemma:gemma-core:jar:1.29.1:compile    \- org.apache.jena:jena-larq:jar:1.0.0-incubating:compile       \- (org.apache.jena:jena-arq:jar:2.9.0-incubating:compile - omitted for conflict with 2.9.4) gemma:gemma:pom:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- org.apache.jena:jena-larq:jar:1.0.0-incubating:compile       \- (org.apache.jena:jena-arq:jar:2.9.0-incubating:compile - omitted for conflict with 2.9.4) 2.9.4 gemma:gemma-cli:jar:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  \- org.apache.jena:jena-arq:jar:2.9.4:compile +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (org.apache.jena:jena-arq:jar:2.9.4:test - omitted for duplicate) \- baseCode:baseCode:jar:1.1.5:compile    \- (org.apache.jena:jena-arq:jar:2.9.4:compile - omitted for duplicate) gemma:gemma-core:jar:1.29.1 +- org.apache.jena:jena-arq:jar:2.9.4:compile \- baseCode:baseCode:jar:1.1.5:compile    \- (org.apache.jena:jena-arq:jar:2.9.4:compile - omitted for duplicate) gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  \- org.apache.jena:jena-arq:jar:2.9.4:compile +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (org.apache.jena:jena-arq:jar:2.9.4:test - omitted for duplicate) \- baseCode:baseCode:jar:1.1.5:compile    \- (org.apache.jena:jena-arq:jar:2.9.4:compile - omitted for duplicate) gemma:gemma:pom:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- org.apache.jena:jena-arq:jar:2.9.4:compile

org.apache.lucene:lucene-core

3.5.0 gemma:gemma-cli:jar:1.29.1 \- gemma:gemma-core:jar:1.29.1:compile    \- org.apache.jena:jena-larq:jar:1.0.0-incubating:compile       \- (org.apache.lucene:lucene-core:jar:3.5.0:compile - omitted for conflict with 3.6.2) gemma:gemma-core:jar:1.29.1 \- org.apache.jena:jena-larq:jar:1.0.0-incubating:compile    \- (org.apache.lucene:lucene-core:jar:3.5.0:compile - omitted for conflict with 3.6.2) gemma:gemma-web:war:1.29.1 \- gemma:gemma-core:jar:1.29.1:compile    \- org.apache.jena:jena-larq:jar:1.0.0-incubating:compile       \- (org.apache.lucene:lucene-core:jar:3.5.0:compile - omitted for conflict with 3.6.2) gemma:gemma:pom:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    \- org.apache.jena:jena-larq:jar:1.0.0-incubating:compile       \- (org.apache.lucene:lucene-core:jar:3.5.0:compile - omitted for conflict with 3.6.2) 3.6.2 gemma:gemma-cli:jar:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  +- org.apache.lucene:lucene-core:jar:3.6.2:compile |  +- org.apache.lucene:lucene-analyzers:jar:3.6.2:compile |  |  \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) |  \- ubc.chibi.compass-fork:compass-fork:jar:1.2.0:compile |     +- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) |     +- org.apache.lucene:lucene-queries:jar:3.6.2:compile |     |  \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) |     +- org.apache.lucene:lucene-queryparser:jar:3.6.2:compile |     |  \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) |     \- org.apache.lucene:lucene-highlighter:jar:3.6.2:compile |        +- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) |        \- org.apache.lucene:lucene-memory:jar:3.6.2:compile |           \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (org.apache.lucene:lucene-core:jar:3.6.2:test - omitted for duplicate) \- baseCode:baseCode:jar:1.1.5:compile    \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) gemma:gemma-core:jar:1.29.1 +- org.apache.lucene:lucene-core:jar:3.6.2:compile +- org.apache.lucene:lucene-analyzers:jar:3.6.2:compile |  \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) +- ubc.chibi.compass-fork:compass-fork:jar:1.2.0:compile |  +- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) |  +- org.apache.lucene:lucene-queries:jar:3.6.2:compile |  |  \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) |  +- org.apache.lucene:lucene-queryparser:jar:3.6.2:compile |  |  \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) |  \- org.apache.lucene:lucene-highlighter:jar:3.6.2:compile |     +- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) |     \- org.apache.lucene:lucene-memory:jar:3.6.2:compile |        \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) \- baseCode:baseCode:jar:1.1.5:compile    \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  +- org.apache.lucene:lucene-core:jar:3.6.2:compile |  +- org.apache.lucene:lucene-analyzers:jar:3.6.2:compile |  |  \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) |  \- ubc.chibi.compass-fork:compass-fork:jar:1.2.0:compile |     +- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) |     +- org.apache.lucene:lucene-queries:jar:3.6.2:compile |     |  \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) |     +- org.apache.lucene:lucene-queryparser:jar:3.6.2:compile |     |  \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) |     \- org.apache.lucene:lucene-highlighter:jar:3.6.2:compile |        +- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) |        \- org.apache.lucene:lucene-memory:jar:3.6.2:compile |           \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (org.apache.lucene:lucene-core:jar:3.6.2:test - omitted for duplicate) \- baseCode:baseCode:jar:1.1.5:compile    \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate) gemma:gemma:pom:1.29.1 \- baseCode:baseCode:jar:1.1.5:compile    +- org.apache.lucene:lucene-core:jar:3.6.2:compile    \- org.apache.lucene:lucene-analyzers:jar:3.6.2:compile       \- (org.apache.lucene:lucene-core:jar:3.6.2:compile - omitted for duplicate)

org.aspectj:aspectjweaver

1.7.4 gemma:gemma-cli:jar:1.29.1 \- org.springframework:spring-aspects:jar:3.2.18.RELEASE:runtime (scope not updated to compile)    \- (org.aspectj:aspectjweaver:jar:1.7.4:runtime - omitted for conflict with 1.9.9.1) gemma:gemma-core:jar:1.29.1 \- org.springframework:spring-aspects:jar:3.2.18.RELEASE:runtime (scope not updated to compile)    \- (org.aspectj:aspectjweaver:jar:1.7.4:runtime - omitted for conflict with 1.9.9.1) gemma:gemma-web:war:1.29.1 \- org.springframework:spring-aspects:jar:3.2.18.RELEASE:runtime (scope not updated to compile)    \- (org.aspectj:aspectjweaver:jar:1.7.4:runtime - omitted for conflict with 1.9.9.1) gemma:gemma:pom:1.29.1 \- org.springframework:spring-aspects:jar:3.2.18.RELEASE:runtime    \- (org.aspectj:aspectjweaver:jar:1.7.4:runtime - omitted for conflict with 1.9.9.1) 1.9.9.1 gemma:gemma-cli:jar:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  \- org.aspectj:aspectjweaver:jar:1.9.9.1:compile +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (org.aspectj:aspectjweaver:jar:1.9.9.1:test - omitted for duplicate) \- pavlab:gemma-gsec:jar:0.0.10:compile    \- (org.aspectj:aspectjweaver:jar:1.9.9.1:compile - omitted for duplicate) gemma:gemma-core:jar:1.29.1 +- org.aspectj:aspectjweaver:jar:1.9.9.1:compile \- pavlab:gemma-gsec:jar:0.0.10:compile    \- (org.aspectj:aspectjweaver:jar:1.9.9.1:compile - omitted for duplicate) gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  \- org.aspectj:aspectjweaver:jar:1.9.9.1:compile +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (org.aspectj:aspectjweaver:jar:1.9.9.1:test - omitted for duplicate) \- pavlab:gemma-gsec:jar:0.0.10:compile    \- (org.aspectj:aspectjweaver:jar:1.9.9.1:compile - omitted for duplicate) gemma:gemma:pom:1.29.1 \- pavlab:gemma-gsec:jar:0.0.10:compile    \- org.aspectj:aspectjweaver:jar:1.9.9.1:compile

org.directwebremoting:dwr

2.0.11-RELEASE gemma:gemma-web:war:1.29.1 \- org.directwebremoting:dwr:jar:2.0.11-RELEASE:compile 2.0.2 gemma:gemma-web:war:1.29.1 \- net.jawr.extensions:jawr-dwr2.x-extension:jar:3.9:runtime    \- (org.directwebremoting:dwr:jar:2.0.2:runtime - omitted for conflict with 2.0.11-RELEASE)

org.jboss.logging:jboss-logging

3.1.0.CR2 gemma:gemma-cli:jar:1.29.1 \- org.hibernate:hibernate-core:jar:4.2.21.Final:compile    \- org.hibernate.common:hibernate-commons-annotations:jar:4.0.2.Final:compile       \- (org.jboss.logging:jboss-logging:jar:3.1.0.CR2:compile - omitted for conflict with 3.1.0.GA) gemma:gemma-core:jar:1.29.1 \- org.hibernate:hibernate-core:jar:4.2.21.Final:compile    \- org.hibernate.common:hibernate-commons-annotations:jar:4.0.2.Final:compile       \- (org.jboss.logging:jboss-logging:jar:3.1.0.CR2:compile - omitted for conflict with 3.1.0.GA) gemma:gemma-web:war:1.29.1 \- org.hibernate:hibernate-core:jar:4.2.21.Final:compile    \- org.hibernate.common:hibernate-commons-annotations:jar:4.0.2.Final:compile       \- (org.jboss.logging:jboss-logging:jar:3.1.0.CR2:compile - omitted for conflict with 3.1.0.GA) gemma:gemma:pom:1.29.1 \- org.hibernate:hibernate-core:jar:4.2.21.Final:compile    \- org.hibernate.common:hibernate-commons-annotations:jar:4.0.2.Final:compile       \- (org.jboss.logging:jboss-logging:jar:3.1.0.CR2:compile - omitted for conflict with 3.1.0.GA) 3.1.0.GA gemma:gemma-cli:jar:1.29.1 +- org.hibernate:hibernate-core:jar:4.2.21.Final:compile |  \- org.jboss.logging:jboss-logging:jar:3.1.0.GA:compile \- org.hibernate:hibernate-ehcache:jar:4.2.21.Final:compile    \- (org.jboss.logging:jboss-logging:jar:3.1.0.GA:compile - omitted for duplicate) gemma:gemma-core:jar:1.29.1 +- org.hibernate:hibernate-core:jar:4.2.21.Final:compile |  \- org.jboss.logging:jboss-logging:jar:3.1.0.GA:compile \- org.hibernate:hibernate-ehcache:jar:4.2.21.Final:compile    \- (org.jboss.logging:jboss-logging:jar:3.1.0.GA:compile - omitted for duplicate) gemma:gemma-web:war:1.29.1 +- org.hibernate:hibernate-core:jar:4.2.21.Final:compile |  \- org.jboss.logging:jboss-logging:jar:3.1.0.GA:compile \- org.hibernate:hibernate-ehcache:jar:4.2.21.Final:compile    \- (org.jboss.logging:jboss-logging:jar:3.1.0.GA:compile - omitted for duplicate) gemma:gemma:pom:1.29.1 +- org.hibernate:hibernate-core:jar:4.2.21.Final:compile |  \- org.jboss.logging:jboss-logging:jar:3.1.0.GA:compile \- org.hibernate:hibernate-ehcache:jar:4.2.21.Final:compile    \- (org.jboss.logging:jboss-logging:jar:3.1.0.GA:compile - omitted for duplicate) 3.2.1.Final gemma:gemma-web:war:1.29.1 \- org.glassfish.jersey.ext:jersey-spring3:jar:2.25.1:compile    \- org.glassfish.hk2:hk2:jar:2.5.0-b32:compile       \- org.glassfish.hk2:hk2-config:jar:2.5.0-b32:compile          \- org.hibernate:hibernate-validator:jar:5.2.4.Final:compile             \- (org.jboss.logging:jboss-logging:jar:3.2.1.Final:compile - omitted for conflict with 3.1.0.GA)

org.jetbrains.kotlin:kotlin-stdlib

1.5.31 gemma:gemma-web:war:1.29.1 \- com.slack.api:slack-api-client:jar:1.27.1:compile    \- com.squareup.okhttp3:okhttp:jar:4.10.0:compile       \- com.squareup.okio:okio-jvm:jar:3.0.0:compile          \- org.jetbrains.kotlin:kotlin-stdlib-jdk8:jar:1.5.31:compile             +- (org.jetbrains.kotlin:kotlin-stdlib:jar:1.5.31:compile - omitted for conflict with 1.6.20)             \- org.jetbrains.kotlin:kotlin-stdlib-jdk7:jar:1.5.31:compile                \- (org.jetbrains.kotlin:kotlin-stdlib:jar:1.5.31:compile - omitted for duplicate) 1.6.20 gemma:gemma-web:war:1.29.1 \- com.slack.api:slack-api-client:jar:1.27.1:compile    \- com.squareup.okhttp3:okhttp:jar:4.10.0:compile       \- org.jetbrains.kotlin:kotlin-stdlib:jar:1.6.20:compile

org.springframework:spring-aop

3.2.17.RELEASE gemma:gemma-web:war:1.29.1 \- org.glassfish.jersey.ext:jersey-spring3:jar:2.25.1:compile    \- (org.springframework:spring-aop:jar:3.2.17.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE) 3.2.18.RELEASE gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  \- (org.springframework:spring-aop:jar:3.2.18.RELEASE:compile - scope updated from runtime; omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (org.springframework:spring-aop:jar:3.2.18.RELEASE:compile - scope updated from test; omitted for duplicate) +- org.springframework:spring-web:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-aop:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework.security:spring-security-taglibs:jar:3.2.10.RELEASE:runtime |  \- (org.springframework:spring-aop:jar:3.2.18.RELEASE:runtime - omitted for duplicate) +- pavlab:gemma-gsec:jar:0.0.10:compile |  +- (org.springframework:spring-aop:jar:3.2.18.RELEASE:runtime - omitted for duplicate) |  \- org.springframework.security:spring-security-config:jar:3.2.10.RELEASE:runtime |     \- (org.springframework:spring-aop:jar:3.2.18.RELEASE:runtime - omitted for duplicate) +- org.springframework:spring-context:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-aop:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework:spring-aop:jar:3.2.18.RELEASE:runtime (scope not updated to compile) +- org.springframework.security:spring-security-core:jar:3.2.10.RELEASE:compile |  \- (org.springframework:spring-aop:jar:3.2.18.RELEASE:compile - omitted for duplicate) \- org.springframework.security:spring-security-acl:jar:3.2.10.RELEASE:compile    \- (org.springframework:spring-aop:jar:3.2.18.RELEASE:compile - omitted for duplicate) 3.2.4.RELEASE gemma:gemma-web:war:1.29.1 \- org.springframework.ws:spring-ws-core:jar:2.1.4.RELEASE:compile    \- (org.springframework:spring-aop:jar:3.2.4.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE)

org.springframework:spring-beans

3.2.17.RELEASE gemma:gemma-web:war:1.29.1 \- org.glassfish.jersey.ext:jersey-spring3:jar:2.25.1:compile    \- (org.springframework:spring-beans:jar:3.2.17.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE) 3.2.18.RELEASE gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  +- ubc.chibi.compass-fork:compass-fork:jar:1.2.0:compile |  |  \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:compile - omitted for duplicate) |  \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:test - omitted for duplicate) +- org.springframework:spring-web:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework:spring-webmvc:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework.security:spring-security-web:jar:3.2.10.RELEASE:compile |  \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework.security:spring-security-taglibs:jar:3.2.10.RELEASE:runtime |  \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:runtime - omitted for duplicate) +- pavlab:gemma-gsec:jar:0.0.10:compile |  +- (org.springframework:spring-beans:jar:3.2.18.RELEASE:compile - omitted for duplicate) |  \- org.springframework.security:spring-security-config:jar:3.2.10.RELEASE:runtime |     \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:runtime - omitted for duplicate) +- org.springframework:spring-beans:jar:3.2.18.RELEASE:compile +- org.springframework:spring-context:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework:spring-context-support:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework:spring-aop:jar:3.2.18.RELEASE:runtime (scope not updated to compile) |  \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:runtime - omitted for duplicate) +- org.springframework:spring-tx:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework.security:spring-security-core:jar:3.2.10.RELEASE:compile |  \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework:spring-jdbc:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:compile - omitted for duplicate) \- org.springframework:spring-orm:jar:3.2.18.RELEASE:compile    \- (org.springframework:spring-beans:jar:3.2.18.RELEASE:compile - omitted for duplicate) 3.2.4.RELEASE gemma:gemma-web:war:1.29.1 \- org.springframework.ws:spring-ws-core:jar:2.1.4.RELEASE:compile    +- org.springframework.ws:spring-xml:jar:2.1.4.RELEASE:compile    |  \- (org.springframework:spring-beans:jar:3.2.4.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE)    +- org.springframework:spring-oxm:jar:3.2.4.RELEASE:compile    |  \- (org.springframework:spring-beans:jar:3.2.4.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE)    \- (org.springframework:spring-beans:jar:3.2.4.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE)

org.springframework:spring-context

3.0.5.RELEASE gemma:gemma-cli:jar:1.29.1 \- gemma:gemma-core:jar:1.29.1:compile    \- org.springframework.retry:spring-retry:jar:1.0.3.RELEASE:compile       \- (org.springframework:spring-context:jar:3.0.5.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE) gemma:gemma-core:jar:1.29.1 \- org.springframework.retry:spring-retry:jar:1.0.3.RELEASE:compile    \- (org.springframework:spring-context:jar:3.0.5.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE) gemma:gemma-web:war:1.29.1 \- gemma:gemma-core:jar:1.29.1:compile    \- org.springframework.retry:spring-retry:jar:1.0.3.RELEASE:compile       \- (org.springframework:spring-context:jar:3.0.5.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE) 3.2.18.RELEASE gemma:gemma-cli:jar:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  +- ubc.chibi.compass-fork:compass-fork:jar:1.2.0:compile |  |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for conflict with 3.0.5.RELEASE) |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:test - omitted for duplicate) +- pavlab:gemma-gsec:jar:0.0.10:compile |  +- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) |  +- org.springframework.security:spring-security-config:jar:3.2.10.RELEASE:runtime |  |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:runtime - omitted for duplicate) |  \- org.springframework.security:spring-security-web:jar:3.2.10.RELEASE:compile |     +- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) |     \- org.springframework:spring-web:jar:3.2.18.RELEASE:compile |        \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework:spring-context:jar:3.2.18.RELEASE:compile +- org.springframework:spring-context-support:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework.security:spring-security-core:jar:3.2.10.RELEASE:compile |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) \- org.springframework.security:spring-security-acl:jar:3.2.10.RELEASE:compile    \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) gemma:gemma-core:jar:1.29.1 +- ubc.chibi.compass-fork:compass-fork:jar:1.2.0:compile |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for conflict with 3.0.5.RELEASE) +- pavlab:gemma-gsec:jar:0.0.10:compile |  +- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for conflict with 3.0.5.RELEASE) |  +- org.springframework.security:spring-security-config:jar:3.2.10.RELEASE:runtime |  |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:runtime - omitted for conflict with 3.0.5.RELEASE) |  \- org.springframework.security:spring-security-web:jar:3.2.10.RELEASE:compile |     +- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for conflict with 3.0.5.RELEASE) |     \- org.springframework:spring-web:jar:3.2.18.RELEASE:compile |        \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for conflict with 3.0.5.RELEASE) +- org.springframework:spring-context:jar:3.2.18.RELEASE:compile +- org.springframework:spring-context-support:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework.security:spring-security-core:jar:3.2.10.RELEASE:compile |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) \- org.springframework.security:spring-security-acl:jar:3.2.10.RELEASE:compile    \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  +- ubc.chibi.compass-fork:compass-fork:jar:1.2.0:compile |  |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for conflict with 3.0.5.RELEASE) |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:test - omitted for duplicate) +- org.springframework:spring-web:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework:spring-webmvc:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework.security:spring-security-web:jar:3.2.10.RELEASE:compile |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework.security:spring-security-taglibs:jar:3.2.10.RELEASE:runtime |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:runtime - omitted for duplicate) +- pavlab:gemma-gsec:jar:0.0.10:compile |  +- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) |  \- org.springframework.security:spring-security-config:jar:3.2.10.RELEASE:runtime |     \- (org.springframework:spring-context:jar:3.2.18.RELEASE:runtime - omitted for duplicate) +- org.springframework:spring-context:jar:3.2.18.RELEASE:compile +- org.springframework:spring-context-support:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework.security:spring-security-core:jar:3.2.10.RELEASE:compile |  \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) \- org.springframework.security:spring-security-acl:jar:3.2.10.RELEASE:compile    \- (org.springframework:spring-context:jar:3.2.18.RELEASE:compile - omitted for duplicate) 3.2.3.RELEASE gemma:gemma-web:war:1.29.1 \- org.glassfish.jersey.ext:jersey-spring3:jar:2.25.1:compile    \- org.glassfish.hk2:spring-bridge:jar:2.5.0-b32:compile       \- (org.springframework:spring-context:jar:3.2.3.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE) 3.2.4.RELEASE gemma:gemma-web:war:1.29.1 \- org.springframework.ws:spring-ws-core:jar:2.1.4.RELEASE:compile    +- org.springframework.ws:spring-xml:jar:2.1.4.RELEASE:compile    |  \- (org.springframework:spring-context:jar:3.2.4.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE)    \- (org.springframework:spring-context:jar:3.2.4.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE)

org.springframework:spring-core

3.2.17.RELEASE gemma:gemma-web:war:1.29.1 \- org.glassfish.jersey.ext:jersey-spring3:jar:2.25.1:compile    \- (org.springframework:spring-core:jar:3.2.17.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE) 3.2.18.RELEASE gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  +- ubc.chibi.compass-fork:compass-fork:jar:1.2.0:compile |  |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:compile - omitted for duplicate) |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:test - omitted for duplicate) +- org.springframework:spring-web:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework:spring-webmvc:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework.security:spring-security-web:jar:3.2.10.RELEASE:compile |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework.security:spring-security-taglibs:jar:3.2.10.RELEASE:runtime |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:runtime - omitted for duplicate) +- pavlab:gemma-gsec:jar:0.0.10:compile |  +- (org.springframework:spring-core:jar:3.2.18.RELEASE:compile - omitted for duplicate) |  \- org.springframework.security:spring-security-config:jar:3.2.10.RELEASE:runtime |     \- (org.springframework:spring-core:jar:3.2.18.RELEASE:runtime - omitted for duplicate) +- org.springframework:spring-core:jar:3.2.18.RELEASE:compile +- org.springframework:spring-beans:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework:spring-expression:jar:3.2.18.RELEASE:runtime (scope not updated to compile) |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:runtime - omitted for duplicate) +- org.springframework:spring-context:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework:spring-context-support:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework:spring-aop:jar:3.2.18.RELEASE:runtime (scope not updated to compile) |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:runtime - omitted for duplicate) +- org.springframework:spring-tx:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework.security:spring-security-core:jar:3.2.10.RELEASE:compile |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework.security:spring-security-acl:jar:3.2.10.RELEASE:compile |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework:spring-jdbc:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework:spring-orm:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-core:jar:3.2.18.RELEASE:compile - omitted for duplicate) \- org.springframework:spring-test:jar:3.2.18.RELEASE:test    \- (org.springframework:spring-core:jar:3.2.18.RELEASE:test - omitted for duplicate) 3.2.4.RELEASE gemma:gemma-web:war:1.29.1 \- org.springframework.ws:spring-ws-core:jar:2.1.4.RELEASE:compile    +- org.springframework.ws:spring-xml:jar:2.1.4.RELEASE:compile    |  \- (org.springframework:spring-core:jar:3.2.4.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE)    +- org.springframework:spring-oxm:jar:3.2.4.RELEASE:compile    |  \- (org.springframework:spring-core:jar:3.2.4.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE)    \- (org.springframework:spring-core:jar:3.2.4.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE)

org.springframework:spring-web

3.1.4.RELEASE gemma:gemma-web:war:1.29.1 \- org.springframework.social:spring-social-core:jar:1.0.3.RELEASE:runtime    \- (org.springframework:spring-web:jar:3.1.4.RELEASE:runtime - omitted for conflict with 3.2.18.RELEASE) 3.2.17.RELEASE gemma:gemma-web:war:1.29.1 \- org.glassfish.jersey.ext:jersey-spring3:jar:2.25.1:compile    \- (org.springframework:spring-web:jar:3.2.17.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE) 3.2.18.RELEASE gemma:gemma-web:war:1.29.1 +- org.springframework:spring-web:jar:3.2.18.RELEASE:compile +- org.springframework:spring-webmvc:jar:3.2.18.RELEASE:compile |  \- (org.springframework:spring-web:jar:3.2.18.RELEASE:compile - omitted for duplicate) +- org.springframework.security:spring-security-web:jar:3.2.10.RELEASE:compile |  \- (org.springframework:spring-web:jar:3.2.18.RELEASE:compile - omitted for duplicate) \- org.springframework.security:spring-security-taglibs:jar:3.2.10.RELEASE:runtime    \- (org.springframework:spring-web:jar:3.2.18.RELEASE:runtime - omitted for duplicate) 3.2.4.RELEASE gemma:gemma-web:war:1.29.1 \- org.springframework.ws:spring-ws-core:jar:2.1.4.RELEASE:compile    \- (org.springframework:spring-web:jar:3.2.4.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE)

org.springframework:spring-webmvc

3.2.18.RELEASE gemma:gemma-web:war:1.29.1 \- org.springframework:spring-webmvc:jar:3.2.18.RELEASE:compile 3.2.4.RELEASE gemma:gemma-web:war:1.29.1 \- org.springframework.ws:spring-ws-core:jar:2.1.4.RELEASE:compile    \- (org.springframework:spring-webmvc:jar:3.2.4.RELEASE:compile - omitted for conflict with 3.2.18.RELEASE)

xerces:xercesImpl

2.10.0 gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  +- org.apache.jena:jena-core:jar:2.7.4:compile |  |  \- (xerces:xercesImpl:jar:2.10.0:compile - omitted for duplicate) |  +- org.apache.jena:jena-larq:jar:1.0.0-incubating:compile |  |  \- (xerces:xercesImpl:jar:2.10.0:compile - omitted for duplicate) |  \- (xerces:xercesImpl:jar:2.10.0:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (xerces:xercesImpl:jar:2.10.0:test - omitted for duplicate) \- xerces:xercesImpl:jar:2.10.0:compile 2.4.0 gemma:gemma-web:war:1.29.1 \- rome:rome-fetcher:jar:1.0:compile    \- (xerces:xercesImpl:jar:2.4.0:compile - omitted for conflict with 2.10.0)

xml-apis:xml-apis

1.3.04 gemma:gemma-cli:jar:1.29.1 \- xalan:xalan:jar:2.7.2:compile    \- xalan:serializer:jar:2.7.2:compile       \- (xml-apis:xml-apis:jar:1.3.04:compile - omitted for conflict with 1.4.01) gemma:gemma-core:jar:1.29.1 \- xalan:xalan:jar:2.7.2:compile    \- xalan:serializer:jar:2.7.2:compile       \- (xml-apis:xml-apis:jar:1.3.04:compile - omitted for conflict with 1.4.01) gemma:gemma-web:war:1.29.1 \- xalan:xalan:jar:2.7.2:compile    \- xalan:serializer:jar:2.7.2:compile       \- (xml-apis:xml-apis:jar:1.3.04:compile - omitted for conflict with 1.4.01) gemma:gemma:pom:1.29.1 \- xalan:xalan:jar:2.7.2:compile    \- xalan:serializer:jar:2.7.2:compile       \- (xml-apis:xml-apis:jar:1.3.04:compile - omitted for conflict with 1.4.01) 1.4.01 gemma:gemma-cli:jar:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  \- (xml-apis:xml-apis:jar:1.4.01:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (xml-apis:xml-apis:jar:1.4.01:test - omitted for duplicate) +- baseCode:baseCode:jar:1.1.5:compile |  \- (xml-apis:xml-apis:jar:1.4.01:compile - omitted for duplicate) +- xml-apis:xml-apis:jar:1.4.01:compile \- xerces:xercesImpl:jar:2.10.0:compile    \- (xml-apis:xml-apis:jar:1.4.01:compile - omitted for duplicate) gemma:gemma-core:jar:1.29.1 +- baseCode:baseCode:jar:1.1.5:compile |  \- (xml-apis:xml-apis:jar:1.4.01:compile - omitted for duplicate) +- xml-apis:xml-apis:jar:1.4.01:compile \- xerces:xercesImpl:jar:2.10.0:compile    \- (xml-apis:xml-apis:jar:1.4.01:compile - omitted for duplicate) gemma:gemma-web:war:1.29.1 +- gemma:gemma-core:jar:1.29.1:compile |  \- (xml-apis:xml-apis:jar:1.4.01:compile - omitted for duplicate) +- gemma:gemma-core:test-jar:tests:1.29.1:test |  \- (xml-apis:xml-apis:jar:1.4.01:test - omitted for duplicate) +- baseCode:baseCode:jar:1.1.5:compile |  \- (xml-apis:xml-apis:jar:1.4.01:compile - omitted for duplicate) +- xml-apis:xml-apis:jar:1.4.01:compile \- xerces:xercesImpl:jar:2.10.0:compile    \- (xml-apis:xml-apis:jar:1.4.01:compile - omitted for duplicate) gemma:gemma:pom:1.29.1 +- baseCode:baseCode:jar:1.1.5:compile |  \- (xml-apis:xml-apis:jar:1.4.01:compile - omitted for duplicate) +- xml-apis:xml-apis:jar:1.4.01:compile \- xerces:xercesImpl:jar:2.10.0:compile    \- (xml-apis:xml-apis:jar:1.4.01:compile - omitted for duplicate)