Package ubic.gemma.persistence.service.genome.sequenceAnalysis

Interface BlatResultService

All Superinterfaces:

BaseService<BlatResult>, BaseVoEnabledService<BlatResult,BlatResultValueObject>

All Known Implementing Classes:

BlatResultServiceImpl

public interface BlatResultService
extends BaseVoEnabledService<BlatResult,BlatResultValueObject>

Author:

paul

Method Summary

Modifier and Type	Method	Description
Collection<BlatResult>	findByBioSequence(BioSequence bioSequence)
void	remove(BlatResult blatResult)	Removes the given entity from the persistent storage.
Collection<BlatResult>	thaw(Collection<BlatResult> blatResults)
BlatResult	thaw(BlatResult blatResult)
void	update(BlatResult blatResult)	Updates the given entity in the persistent storage.

Methods inherited from interface ubic.gemma.persistence.service.BaseService

countAll, create, create, find, findOrCreate, load, load, loadAll, remove, remove, removeAll, save, save, update

Methods inherited from interface ubic.gemma.persistence.service.BaseVoEnabledService

loadAllValueObjects, loadValueObject, loadValueObjectById, loadValueObjects, loadValueObjectsByIds

Method Detail

findByBioSequence

Collection<BlatResult> findByBioSequence(BioSequence bioSequence)

remove

@Secured("GROUP_USER")
void remove(BlatResult blatResult)

Description copied from interface: BaseService

Removes the given entity from the persistent storage.

Specified by:

remove in interface BaseService<BlatResult>

Parameters:

blatResult - the entity to be removed.

update

@Secured("GROUP_USER")
void update(BlatResult blatResult)

Description copied from interface: BaseService

Updates the given entity in the persistent storage.

Specified by:

update in interface BaseService<BlatResult>

Parameters:

blatResult - the entity to be updated.

thaw

BlatResult thaw(BlatResult blatResult)

thaw

Collection<BlatResult> thaw(Collection<BlatResult> blatResults)